Information for 7-TCATGGCTCCAC (Motif 9)


Reverse Opposite:

p-value:1e-4
log p-value:-9.602e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets143.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TCATGGCTCCAC
------ATCCAC

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATGGCTCCAC----
AGCTCGGCGCCAAAAGC

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCATGGCTCCAC----
----GGCTCYAKCAYC

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCATGGCTCCAC
-----GCTCCG-

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCATGGCTCCAC
TTTNATTGCY----

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCATGGCTCCAC
GTTAATGGCC----

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCATGGCTCCAC----
CCTTCGGCGCCAAAAGG

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCATGGCTCCAC
GTCATN-------

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TCATGGCTCCAC
NGANTTTTATGGCTCN--

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCATGGCTCCAC-
-TTTGGCGCCAAA