Information for 2-TCCTTGGG (Motif 10)


Reverse Opposite:

p-value:1e-4
log p-value:-1.033e+01
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif72.22%
Number of Background Sequences with motif12661.2
Percentage of Background Sequences with motif24.89%
Average Position of motif in Targets63.1 +/- 48.7bp
Average Position of motif in Background99.9 +/- 69.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTGGG
TGACCTTGAN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCCTTGGG---
TCCCCTGGGGAC

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCCTTGGG
BNTGDCCTTG--

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTGGG
TGACCTTGAV

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCCTTGGG---
TACTTGGCAGA

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTGGG----
GCACCCCTGGGTGCC

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTGGG---
ANTCCCTNGGGAAT

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCCTTGGG---
NABTCCCWDGGGAVH

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCTTGGG-
AACCTTATAT

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCCTTGGG-
GTGACCTTGRVN