Information for 3-ABCAAGTR (Motif 11)


Reverse Opposite:

p-value:1e-4
log p-value:-1.013e+01
Information Content per bp:1.618
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif72.22%
Number of Background Sequences with motif12886.0
Percentage of Background Sequences with motif25.34%
Average Position of motif in Targets108.6 +/- 64.8bp
Average Position of motif in Background100.5 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ABCAAGTR-
NTCAAGTGG

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ABCAAGTR
AGAGGAAGTG

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ABCAAGTR--
NTCAAGTGGN

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ABCAAGTR
ANCAGGAAGT-

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ABCAAGTR
ACAGGAAGTG

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ABCAAGTR
ACVAGGAAGT-

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ABCAAGTR--
ACCAACTGTC

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ABCAAGTR---
-TTRAGTGSYK

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ABCAAGTR--
-TTAAGTGGN

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ABCAAGTR
ACAGGAAGTG