Information for 9-AACAGGATGCTA (Motif 12)


Reverse Opposite:

p-value:1e-3
log p-value:-8.929e+00
Information Content per bp:1.599
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif2425.1
Percentage of Background Sequences with motif4.77%
Average Position of motif in Targets73.0 +/- 34.5bp
Average Position of motif in Background97.9 +/- 69.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AACAGGATGCTA
ANCAGGATGT--

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AACAGGATGCTA
AACAGGAAGT--

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACAGGATGCTA
ACCCGGATGTA-

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AACAGGATGCTA
TGTAAACAGGA-----

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AACAGGATGCTA
AANNATCCGGATGTNN

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACAGGATGCTA--
CTACTAGGATGTNNTN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACAGGATGCTA
NACAGGAAAT--

SIX1/MA1118.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AACAGGATGCTA
TATCAGGTTAC--

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AACAGGATGCTA
-ACAGGAAGTG-

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AACAGGATGCTA-
---MTGATGCAAT