Information for 3-GATCTGCACG (Motif 14)


Reverse Opposite:

p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background123.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GATCTGCACG---
-----GCACGTAY

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GATCTGCACG---
-----GCACGTNC

HIF1A/MA1106.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GATCTGCACG---
---NNGCACGTNC

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GATCTGCACG-----
CAGATGTGCACATACGT

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATCTGCACG--
NNGCNCTGCGCGGC

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GATCTGCACG--
----BGCACGTA

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATCTGCACG-----
TACATGTGCACATAAAA

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GATCTGCACG-----
-----GCACGTACCC

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GATCTGCACG----
----GGCACGCGTC

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GATCTGCACG
DCTCAGCAGG