Information for 5-TAAATGATAC (Motif 16)


Reverse Opposite:

p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background143.3 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGATAC------
ANANNTGATACCCNATN

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAAATGATAC
GCTAAACGGT--

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGATAC------
ANNNATGATACCCCATC

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGATAC------
AATNTTGATACCCTATN

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGATAC------
ANANNTGATACCCTATN

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TAAATGATAC------
ATAAATGACACCTATCA

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TAAATGATAC---
--NTTGATACATT

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGATAC------
ANANGTGATACCCTATN

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGATAC------
ANANGTGATACCCTATN

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGATAC------
ANANGTGATACCCCATT