Information for 10-GAGATCGGAG (Motif 18)


Reverse Opposite:

p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background72.0 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0127.1_Gata6_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GAGATCGGAG--
GCGGCGATATCGCAGCG

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GAGATCGGAG-
-----CGGAGC

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGATCGGAG----
AAAGATCAAAGGGTT

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGATCGGAG-
AAAGATCAAAGG

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGATCGGAG------
AAGATCGGAANTNNNA

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGATCGGAG-----
NANAGATCAAAGGGNNN

TCF7L1/MA1421.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGATCGGAG-
AAAGATCAAAGG

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGATCGGAG---
GGAGAAAGGTGCGA

GATA6/MA1104.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGATCGGAG-
AAAAGATAAGAAA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGATCGGAG-----
NNNAGATCAAAGGANNN