Information for 12-GTTGCGGTTC (Motif 19)


Reverse Opposite:

p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background83.2 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GTTGCGGTTC
-TTGCGGTTT

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GTTGCGGTTC
TTTGCGGTTT

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTTGCGGTTC--
CAGTTTCGNTTCTN

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCGGTTC--
NTGGTTTCGGTTNNN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTTGCGGTTC
-TGTCGGTT-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTTGCGGTTC
NNTGTGGTTT

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTTGCGGTTC-
TNTGGTTTCGATACN

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCGGTTC--
TNAGTTTCGATTTTN

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTTGCGGTTC-
AGTTTCAKTTTC

IRF4/MA1419.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTGCGGTTC---
TAGTTTCGGTTTCGG