Information for 10-GAGGGAATACTG (Motif 20)


Reverse Opposite:

p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGAATACTG
NNGGGGAATNC--

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAATACTG
GGGCGGGAAGG---

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAATACTG
GGCGGGAARN---

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGGGAATACTG
CWGGCGGGAA-----

TFDP1/MA1122.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAATACTG
GGGCGGGAAGG---

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAATACTG---
TGTAGGGATTAATTGTC

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAATACTG---
TGAAGGGATTAATCATC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAATACTG
TGGCGGGAAAHB--

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGAATACTG
NNNNGGGGGAAGANGG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGGAATACTG
CCWGGAATGY--