Information for 11-GTTTGAAACTTT (Motif 21)


Reverse Opposite:

p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTTTGAAACTTT
-TTTGAAACCG-

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTTTGAAACTTT
-ACTGAAACCA-

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTTGAAACTTT
ATTTGAATT---

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTTTGAAACTTT
GAAAAGGTGTGAAAATT-

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTTGAAACTTT
AGGTGTGAAA----

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTTTGAAACTTT
AGGTGTGAAA----

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTGAAACTTT
-TTTCACACCTN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTTGAAACTTT
-KTTCACACCT-

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTTTGAAACTTT
-NTTGATACATT

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTTTGAAACTTT
AAGGTGTGAAAAT--