Information for 13-GACTGTTTGTAT (Motif 23)


Reverse Opposite:

p-value:1e-3
log p-value:-7.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background104.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GACTGTTTGTAT
GAATGTTTGTTT

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GACTGTTTGTAT
---TGTTTATTT

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GACTGTTTGTAT--
--NTGTTTAYATWW

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACTGTTTGTAT
TATTGTTTATT-

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GACTGTTTGTAT---
---TGTTTAYTTAGC

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GACTGTTTGTAT-
-CBTGTTTAYAWW

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACTGTTTGTAT
BRRCVGTTDN---

POU5F1/MA1115.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GACTGTTTGTAT--
---NATTTGCATNN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACTGTTTGTAT
TGGCAGTTGG---

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GACTGTTTGTAT-
-TTTGTTTACTTA