Information for 17-CACCGCCTCG (Motif 33)


Reverse Opposite:

p-value:1e-3
log p-value:-7.254e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background110.3 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACCGCCTCG
GGCCCCGCCCCC

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACCGCCTCG
GCCCCGCCCCC

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACCGCCTCG----
TCACCCCGCCCCAAATT

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACCGCCTCG----
GCCCCGCCCCCTCCC

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACCGCCTCG-
NAGCCCCGCCCCCN

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACCGCCTCG
YGGCCCCGCCCC-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACCGCCTCG----
ATCCCCGCCCCTAAAA

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACCGCCTCG-
GCTCCGCCCMCY

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACCGCCTCG---
TACGCCCCGCCACTCTG

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACCGCCTCG
GCTCGGSCTC-