Information for 19-CTAGTACTCG (Motif 35)


Reverse Opposite:

p-value:1e-3
log p-value:-7.254e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background81.4 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CTAGTACTCG----
TTCNAAGTACTTNNNNN

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTAGTACTCG-
NGNTCTAGAACCNGV

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTACTCG--
NNGATCTAGAACCTNNN

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTAGTACTCG----
CGAACAGTGCTCACTAT

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTAGTACTCG----
TTTTAAGTACTTAAATT

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTACTCG
GCTCGGSCTC-

PH0112.1_Nkx2-3/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTAGTACTCG---
CTTTAAGTACTTAATG

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTAGTACTCG---
NATTTAAGTACTTANNA

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CTAGTACTCG
TATCATTAGAACGCT

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTAGTACTCG-----
NNAATTCTCGNTNAN