Information for 22-CTTTGTACCG (Motif 37)


Reverse Opposite:

p-value:1e-3
log p-value:-7.254e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background127.1 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTACCG
YCTTTGTTCC-

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTACCG
NNCTTTGTTNN-

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTACCG
CCWTTGTYYB-

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTACCG
CCTTTGTTTT-

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CTTTGTACCG
AGGVNCCTTTGT----

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGTACCG-
TGGACTTTGNNCTCN

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTACCG--
TNNTCCTTTGTTCTNNT

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTACCG
CCWTTGTY---

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTACCG
CCATTGTTTT-

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTACCG
CCATTGTTNY-