Information for 23-TCATGGTCCG (Motif 38)


Reverse Opposite:

p-value:1e-3
log p-value:-7.254e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets111.0 +/- 0.0bp
Average Position of motif in Background78.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TCATGGTCCG-
-TWVGGTCCGC

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCATGGTCCG---
-CAACGTCCGCGG

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCATGGTCCG
CTCATTGTC--

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCATGGTCCG-
AAGTTCAAGGTCAGC

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCATGGTCCG
BTCAAGGTCA-

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATGGTCCG
NTCAAGGTCA-

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCATGGTCCG-
TCAAGGTCATA

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCATGGTCCG
GTCATN-----

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCATGGTCCG
TTCAAGGTCAT

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCATGGTCCG
AGTCACGC----