Information for 22-TCCTGAACTTCA (Motif 41)


Reverse Opposite:

p-value:1e-3
log p-value:-7.254e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background65.5 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCTGAACTTCA
---TGAACTCA-

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCCTGAACTTCA
--TTGAMCTTTG

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCCTGAACTTCA
--ATGACCTTGA

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCCTGAACTTCA
--NTGACCTTGA

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCTGAACTTCA
-NNTGACCTTTN

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCCTGAACTTCA--
--GTGACCTTGRVN

NR4A1/MA1112.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCTGAACTTCA
--NTGACCTTTN

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCCTGAACTTCA-
---TGACCTTGAT

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCCTGAACTTCA
--GTGACCTT--

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCTGAACTTCA
-NATGACCTTGA