Information for 24-TCTGTTCTTTCA (Motif 42)


Reverse Opposite:

p-value:1e-3
log p-value:-7.254e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background158.9 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCTGTTCTTTCA
-CTGTTCCTGG-

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCTGTTCTTTCA
NCNTTTGTTATTTNN

TCF7L1/MA1421.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGTTCTTTCA
CCTTTGATCTTT--

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTGTTCTTTCA----
--TTTTTTTTCNNGTN

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGTTCTTTCA
CCTTTGATCTTT--

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTGTTCTTTCA----
NNCATTCATTCATNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTGTTCTTTCA--
----TGGTTTCAGT

ZNF384/MA1125.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTGTTCTTTCA--
--TTTTTTTTTANN

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGTTCTTTCA
AACCCTTTGATCTTT--

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGTTCTTTCA
VCCTCTCTGDDY-----