Information for 8-ACABATGTGCTT (Motif 8)


Reverse Opposite:

p-value:1e-5
log p-value:-1.263e+01
Information Content per bp:1.781
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif27.78%
Number of Background Sequences with motif684.9
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets63.5 +/- 58.8bp
Average Position of motif in Background105.9 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACABATGTGCTT
DMCAGATGKS---

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACABATGTGCTT
ACCATATGTT---

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACABATGTGCTT
AACATATGTC---

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACABATGTGCTT-
CNGACACCTGTTCNNN

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACABATGTGCTT
CCATATGT----

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACABATGTGCTT
AACAGCTGTT---

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACABATGTGCTT
NAMCAGCTGK----

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACABATGTGCTT
ACAGCTGTTN--

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACABATGTGCTT
DRVCAGCTGK----

TWIST1/MA1123.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACABATGTGCTT
ATTCCAGATGTTT--