Information for 1-TCMWAGGCCCYW (Motif 1)


Reverse Opposite:

p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.867
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif35.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets151.0 +/- 26.5bp
Average Position of motif in Background86.0 +/- 83.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCMWAGGCCCYW
--CTAGGCCT--

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCMWAGGCCCYW-
---AAGACCCYYN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCMWAGGCCCYW
--CNAGGCCT--

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCMWAGGCCCYW---
AAGCATACGCCCAACTT

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCMWAGGCCCYW
ACWTCAAAGG-----

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCMWAGGCCCYW
ACATCAAAGG-----

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCMWAGGCCCYW--
----KGGCCYCWTD

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCMWAGGCCCYW
ASATCAAAGG-----

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCMWAGGCCCYW
NTCAAGGTCA--

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCMWAGGCCCYW-----
---CAGGCCNNGGCCNN