Information for 9-AAATGGATCATA (Motif 11)


Reverse Opposite:

p-value:1e-4
log p-value:-9.433e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets192.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAATGGATCATA
---NGGATTAN-

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAATGGATCATA-
AAAAACGGATTATTG

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAATGGATCATA
-AATGTATCAAT

JDP2/MA0655.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAATGGATCATA
--ATGACTCAT-

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAATGGATCATA
WAABTAGGTCAV-

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAATGGATCATA
NTATCGATTA--

RORB/MA1150.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAATGGATCATA
AATTAGGTCAC-

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAATGGATCATA
AAAAAATCGATAAT-

FOSL1::JUND/MA1142.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAATGGATCATA
--ATGAGTCATN

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAATGGATCATA
AAAAAATCGATAAT-