Information for 12-GAAAAATAAACT (Motif 14)


Reverse Opposite:

p-value:1e-4
log p-value:-9.433e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.0 +/- 0.0bp
Average Position of motif in Background106.5 +/- 40.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAATAAACT--
GGAAANTGAAACTNA

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAAAAATAAACT
GAAAMTGAAACT

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAAAAATAAACT
GAAACTGAAACT

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAAAAATAAACT
TTTAGAACAATAAAAT

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAAAAATAAACT--
GTTAAAAAAAAAAATTA

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAAAATAAACT
GAAAGTGAAAGT

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAAAAATAAACT
TTAAGAACAATAAATT

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAAAAATAAACT
GCTAARTAAACA

ZNF384/MA1125.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAAAAATAAACT
TTTAAAAAAAAA--

IRF7/MA0772.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAAAAATAAACT
ACGAAAGCGAAAGT