Information for 14-TCTAAGACTTTC (Motif 15)


Reverse Opposite:

p-value:1e-3
log p-value:-8.740e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background161.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCTAAGACTTTC---
TTTTACGACTTTCCAT

PRDM1/MA0508.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCTAAGACTTTC--
----TCACTTTCAC

HSF2/MA0770.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCTAAGACTTTC
TTCTAGAACGTTC

HSF1/MA0486.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCTAAGACTTTC
TTCTAGAACGTTC

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCTAAGACTTTC
NNNTTTTACGACNTTN

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCTAAGACTTTC
NNGTTTTACGACTTTA

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTAAGACTTTC--
TTCTAGAABNTTCTA

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTAAGACTTTC
TTCTAGAACGTTC

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCTAAGACTTTC------
------ACTTTCACTTTC

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTAAGACTTTC
ANNTTTTACGACNTNN