Information for 17-AAGGGTGCTTCA (Motif 17)


Reverse Opposite:

p-value:1e-3
log p-value:-8.740e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background173.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AAGGGTGCTTCA
------GCTTCC

FOSL2/MA0478.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGGGTGCTTCA-
--GGATGACTCAT

JUNB/MA0490.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGGGTGCTTCA-
--GGATGACTCAT

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAGGGTGCTTCA
GGAGAAAGGTGCGA--

JUN(var.2)/MA0489.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGGGTGCTTCA-
AGGAGATGACTCAT

FOSL1/MA0477.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGGGTGCTTCA--
---GGTGACTCATG

KLF4/MA0039.3/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGTGCTTCA
NNAGGGTGTGG--

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGGGTGCTTCA--
--GGATGACTCATC

FOSL2::JUN/MA1130.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGGGTGCTTCA--
--GGATGAGTCATC

PB0142.1_Jundm2_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAGGGTGCTTCA----
ATTGATGAGTCACCAA