| p-value: | 1e-3 |
| log p-value: | -8.740e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 2.5 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 48.0 +/- 0.0bp |
| Average Position of motif in Background | 106.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 1 |
| Score: | 0.62
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CCTAATAGCCCC
-CTAATKGV--- |
|
|
|
Barhl1/MA0877.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CCTAATAGCCCC
GCTAATTGCT-- |
|
|
|
BARX1/MA0875.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CCTAATAGCCCC
-NTAATTGN--- |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 4 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CCTAATAGCCCC
GTTAATGGCC-- |
|
|
|
VENTX/MA0724.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.56
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CCTAATAGCCCC
-CTAATCGNT-- |
|
|
|
BSX/MA0876.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.56
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CCTAATAGCCCC
-NTAATTGG--- |
|
|
|
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.56
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CCTAATAGCCCC
TTCAAAWTAAAAGTC-- |
|
|
|
PH0024.1_Dlx5/Jaspar
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CCTAATAGCCCC
NANNGNTAATTACCNN |
|
|
|
EN2/MA0642.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CCTAATAGCCCC
GNTAATTGGN-- |
|
|
|
EMX1/MA0612.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CCTAATAGCCCC
CCTAATTACC-- |
|
|
|
