Information for 23-GTCCCTAGTA (Motif 36)


Reverse Opposite:

p-value:1e-3
log p-value:-6.949e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.0 +/- 0.0bp
Average Position of motif in Background109.5 +/- 94.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCCCTAGTA-----
GCACAYAGTAGGKCY

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCCCTAGTA
ATTTCCAAGAA

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCCCTAGTA----
TTTCCTAGAAAGCA

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCCCTAGTA----
--SCCTAGCAACAG

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCCCTAGTA
TTCCKNAGAA

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCCCTAGTA
AGGTCTCTAACC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCTAGTA
CTGTTCCTGG--

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCCCTAGTA-
NGTCCCNNGGGA

NFIC/MA0161.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTAGTA
NNTGCCAAGNN

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTCCCTAGTA
-TCCCCA---