Information for 2-GCCGCGGC (Motif 37)


Reverse Opposite:

p-value:1e-2
log p-value:-5.585e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif47.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets18.5 +/- 0.5bp
Average Position of motif in Background109.1 +/- 118.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCGCGGC---
CAGGCCNNGGCCNN

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCGCGGC
NANTGCSGCA--

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCGGC----
ATGCCCGGGCATGT

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCGCGGC-
CGCAGCTGCG

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCGCGGC---
GGCCCCGCCCCC

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCGCGGC-
SSRGCAGCTGCH

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCGCGGC--
TGATGACGTGGCAN

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCGCGGC------
TAAGCCACGCCCCCTTT

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCCGCGGC
NNGCNCTGCGCGGC

ASCL1/MA1100.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCGGC---
NNCCAGCTGCTNN