Information for 3-ATATTTTTAGAC (Motif 7)


Reverse Opposite:

p-value:1e-4
log p-value:-9.433e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-ATATTTTTAGAC
TCTATTTTTAGA-

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ATATTTTTAGAC-
TTCTATTTTTAGNNN

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ATATTTTTAGAC
TCTATTTATAGN-

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ATATTTTTAGAC
KCTATTTTTRGH-

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATATTTTTAGAC
GCTATTTTTAGC-

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATATTTTTAGAC
GCTATTTATAGC-

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATATTTTTAGAC
CTATTTTTGG--

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATATTTTTAGAC
GCTATTTTTGGM-

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATATTTTTAGAC-
GNATTTTTTTTTTGANC

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATATTTTTAGAC
CTAATATTGCTAAA-