Information for 11-AGCACAAACTCC (Motif 12)

C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C
Reverse Opposite:
C A T G A C T G C G T A A C T G A C G T A G C T A C G T A T C G A G C T T C A G A G T C G C A T
p-value:1e-42
log p-value:-9.755e+01
Information Content per bp:1.680
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif19.12%
Number of Background Sequences with motif857.5
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets76.2 +/- 28.3bp
Average Position of motif in Background100.4 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCACAAACTCC-
AGCGGCACACACGCAA
 A C G T A C G T A C G T C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCACAAACTCC---
GGGGTCAAAGTCCAAT
 A C G T C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCACAAACTCC-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCACAAACTCC-
AGAGTCCAAAGTCCA
 A C G T A C G T C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCACAAACTCC-----
-GGCAAAAGTCCAATAA
 C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCACAAACTCC------
-TACGAGACTCCTCTAAC
 C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AGCACAAACTCC-
-------GCTCCG
 C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AGCACAAACTCC
ADGGYAGYAGCATCT--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGCACAAACTCC---
TGCACACACTGAAAA
 C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T A C G T A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:10
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------AGCACAAACTCC-
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A T A G C T G C A T C G A T G C A G T A C C G A T G T A C G T A C A C G T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C