Information for 5-CGCMCATCCA (Motif 17)

A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C G T A T C G A C T G A C T G A G T C A C T G
p-value:1e-37
log p-value:-8.692e+01
Information Content per bp:1.917
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif7.21%
Number of Background Sequences with motif34.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets148.9 +/- 13.7bp
Average Position of motif in Background99.6 +/- 69.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGCMCATCCA--
GGACCACCCACG
 A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCMCATCCA--
AGACCACCCASR
 A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T A C G T
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

EGR4/MA0733.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCMCATCCA---
TTACGCCCACGCATTT
 A C G T A C G T A C G T A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CGCMCATCCA-
-----ATCCAC
 A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

ZBTB7B/MA0694.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCMCATCCA-
GCGACCACCGAA
 A C G T A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

EGR1/MA0162.3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGCMCATCCA--
TACGCCCACGCATT
 A C G T A C G T A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T A C G T
G C A T G T C A G T A C C T A G A G T C A G T C A G T C T G C A A G T C A C T G A G T C C T G A G C A T G C A T

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCMCATCCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCMCATCCA------
TCACCCATCAATAAACA
 A C G T A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCMCATCCA
ACGCCCACGCA
 A C G T A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCMCATCCA-
GCGACCACACTG
 A C G T A G T C A C T G G T A C G T A C A T G C C G T A A C G T A G T C A G T C C G T A A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G