Information for 18-GATCCAACTTAG (Motif 22)

A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C T G A A C T G A G C T A C G T A C T G A C T G C G T A A C G T A G T C
p-value:1e-34
log p-value:-8.042e+01
Information Content per bp:1.952
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.3 +/- 34.4bp
Average Position of motif in Background138.5 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GATCCAACTTAG
ATAATCCC------
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GATCCAACTTAG
MTGATGCAAT----
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GATCCAACTTAG
---ACCACTTAA
 A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GATCCAACTTAG
ATGATGCAAT----
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GATCCAACTTAG
AATATGCAAATTAG
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GATCCAACTTAG
---ACCACTTAA
 A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GATCCAACTTAG
GYCATCMATCAT--
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GATCCAACTTAG--
NNAGTCCCACTCNNNN
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GATCCAACTTAG
WATGCAAATGAG
 A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GATCCAACTTAG-
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A C T G A A G T C A G C T A C G T C G T A A C T G A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A