Information for 19-AGAGAGGTGTCT (Motif 23)

C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A A G T C C G T A A G T C A G T C G C A T T A G C A C G T A G T C A C G T
p-value:1e-34
log p-value:-7.923e+01
Information Content per bp:1.897
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets105.1 +/- 76.9bp
Average Position of motif in Background101.4 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGAGAGGTGTCT----
GCGGAGGTGTCGCCTC
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGAGAGGTGTCT
TGACAGGTGTCA
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AGAGAGGTGTCT
----AGGTGTCA
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGAGAGGTGTCT
TGACAGGTGTCA
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGAGAGGTGTCT
-GACAGGTGTN-
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAGAGGTGTCT
TGACAGCTGTCA
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAGAGGTGTCT-----
TNNNNGGTGTCATNTNT
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGGTGTCT
RHHCAGAGAGGB----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAGAGGTGTCT
GNMCAGGTGTGC
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAGAGGTGTCT
----AGGTGTGA
 C G T A A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C T G C G A T A G T C A G C T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A