Information for 23-CTGGARCAGAAH (Motif 26)

A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A
Reverse Opposite:
C G A T C G A T A C G T A T G C C G A T A C T G A G T C A C G T A T G C A G T C C G T A A C T G
p-value:1e-33
log p-value:-7.779e+01
Information Content per bp:1.728
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif14.42%
Number of Background Sequences with motif579.8
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets89.6 +/- 50.4bp
Average Position of motif in Background96.6 +/- 63.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTGGARCAGAAH
-TGGAACAGMA-
 A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGGARCAGAAH--
--GRAASTGAAAST
 A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGGARCAGAAH--
--GGAAGTGAAAST
 A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T A C G T
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTGGARCAGAAH--
--GAAAMTGAAACT
 A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T A C G T
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGGARCAGAAH-
-CGGAAGTGAAAC
 A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGGARCAGAAH-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGGARCAGAAH-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGARCAGAAH--
--GAAACTGAAACT
 A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T A C G T
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGGARCAGAAH--
--GAAAGTGAAAGT
 A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A A C G T A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGGARCAGAAH
CCAGGAACAG---
 A C G T A G T C C G A T T C A G T A C G C G T A C T A G G T A C C G T A T A C G G T C A C G T A G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T