Information for 9-CTTTTAGCCC (Motif 27)

A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C T G
p-value:1e-31
log p-value:-7.276e+01
Information Content per bp:1.965
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets80.9 +/- 37.1bp
Average Position of motif in Background96.9 +/- 65.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGCCC
ANCGTTTANN--
 A C G T A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTTAGCCC-
CCTTTTATAGNC
 A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGCCC
NNCAATTANN--
 A C G T A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTTTAGCCC--------
---TTAACCCTTTVNKKN
 A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTTTAGCCC
TGACCTTTGACCCC
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTTTAGCCC
TGACCTTTGACCCC
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Hnf4a/MA0114.3/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTTTTAGCCC
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTTTTAGCCC
TGACCTTTGACCCC
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGCCC---
GACTTTTAWTTTGAA
 A C G T A C G T A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTTTAGCCC
--ATAATCCC
 A G T C A C G T A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C