Information for 4-AGCGCTCA (Motif 28)

C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A
Reverse Opposite:
A C G T T A C G G T C A A C T G A T G C C T A G A T G C A C G T
p-value:1e-30
log p-value:-7.034e+01
Information Content per bp:1.788
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif17.87%
Number of Background Sequences with motif1194.7
Percentage of Background Sequences with motif2.48%
Average Position of motif in Targets116.9 +/- 58.6bp
Average Position of motif in Background100.0 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCTCA----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCGCTCA--
AGCCACTCAAG
 A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCGCTCA-
AAGCACTTAA
 A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCGCTCA-
AASCACTCAA
 A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCGCTCA
CAGCC----
 A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCGCTCA----
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCGCTCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCGCTCA----
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCGCTCA-----
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGCGCTCA----
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A T C G G T A C A C G T A T G C G T C A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C