Information for 12-CCAGGTCRGT (Motif 29)

A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
Reverse Opposite:
T G C A T A G C A G C T C A T G T G C A A T G C A G T C A C G T A C T G A C T G
p-value:1e-30
log p-value:-6.960e+01
Information Content per bp:1.670
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif25.08%
Number of Background Sequences with motif2614.0
Percentage of Background Sequences with motif5.42%
Average Position of motif in Targets98.7 +/- 58.5bp
Average Position of motif in Background101.8 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCAGGTCRGT--
-CAGGTAAGTAT
 A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCAGGTCRGT
BTCAAGGTCA--
 A C G T A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAGGTCRGT
VCAGGTRDRY
 A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGTCRGT
TCAAGGTCAN-
 A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAGGTCRGT---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAGGTCRGT
NTCAAGGTCA--
 A C G T A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGGTCRGT
TCAAGGTCATA
 A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGTCRGT
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGGTCRGT
TCAAGGTCAT-
 A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCAGGTCRGT
TTCAAGGTCAT-
 A C G T A C G T A G T C G T A C G T C A C T A G A T C G A C G T G T A C T C G A A T C G A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T