Information for 6-AGTATAGC (Motif 33)

C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C
Reverse Opposite:
A C T G G T A C A C G T C G T A A C G T C G T A A T G C A C G T
p-value:1e-28
log p-value:-6.537e+01
Information Content per bp:1.916
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif10.03%
Number of Background Sequences with motif278.0
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets113.9 +/- 45.9bp
Average Position of motif in Background101.2 +/- 55.2bp
Strand Bias (log2 ratio + to - strand density)2.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTATAGC----
CTAATATTGCTAAA
 A C G T A C G T C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTATAGC----
CTAATATTGCTAAA
 A C G T A C G T C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGTATAGC
TGTCTAGA
 C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTATAGC
CCAAAAATAG-
 A C G T A C G T A C G T C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGTATAGC----
GGGATTGCATNN
 C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C A C G T A C G T A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGTATAGC-
----CAGCC
 C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGTATAGC
GCTAAAAATAGC
 A C G T A C G T A C G T A C G T C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGTATAGC
KCCAAAAATAGC
 A C G T A C G T A C G T A C G T C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------AGTATAGC--
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGTATAGC--
AAGGATATNTN
 A C G T C G T A A T C G A C G T C G T A A C G T G T C A A C T G A G T C A C G T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T