Information for 9-GTAAGTGT (Motif 36)

A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A G T C A C G T A G C T C G T A A G T C
p-value:1e-23
log p-value:-5.325e+01
Information Content per bp:1.928
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif13.17%
Number of Background Sequences with motif841.5
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets148.9 +/- 26.3bp
Average Position of motif in Background101.2 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGT-
TTAAGTGGN
 A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTAAGTGT
CAGGTAAGTAT
 A C G T A C G T A C G T A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGT-
TTAAGTGGT
 A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGT--
TTAAGTGCTT
 A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGT
TTAAGTGC
 A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTAAGTGT--
TTRAGTGSYK
 A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTAAGTGT-----
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGTGT-
NTCAAGTGGN
 A C G T A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTAAGTGT-----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGT--
TTGAGTGSTT
 A C T G A C G T C T G A C G T A A C T G A C G T C A T G A C G T A C G T A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T