Information for 3-GGAGCAGGCCAT (Motif 4)

A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A G T C A G T C A G C T A C T G A G T C C G A T A G T C A G T C
p-value:1e-53
log p-value:-1.221e+02
Information Content per bp:1.935
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 32.6bp
Average Position of motif in Background58.1 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCAGGCCAT
AAGGKGRCGCAGGCA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAGGCCAT
CGGAGC-------
 A C G T A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGAGCAGGCCAT
TGGTACATTCCA-
 A C G T A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGAGCAGGCCAT
--AGCGCGCC--
 A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAGGCCAT
GGGGGCGGGGCC-
 A C G T A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCAGGCCAT
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGAGCAGGCCAT----
------GGCCATTAAC
 A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAGCAGGCCAT
GGGGCGGGGCCR
 A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAGGCCAT
GGGAGGACNG---
 A C G T A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGAGCAGGCCAT
---CTAGGCCT-
 A C T G A C T G C G T A A C T G A G T C C T G A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T