Information for 2-SGCTTCAAAT (Motif 8)

A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T C G A T A C G T A C T G C G T A C G T A A C T G A G T C A T C G
p-value:1e-50
log p-value:-1.169e+02
Information Content per bp:1.896
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif33.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets158.7 +/- 29.6bp
Average Position of motif in Background102.3 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:SGCTTCAAAT
-GCTTCC---
 A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-SGCTTCAAAT
CGGTTTCAAA-
 A C G T A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:SGCTTCAAAT
-NATTCAAAT
 A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SGCTTCAAAT
NGCTN-----
 A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:SGCTTCAAAT-
-ACATCAAAGG
 A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SGCTTCAAAT--
--CCAAAAATAG
 A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SGCTTCAAAT---
-GCTAAAAATAGC
 A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SGCTTCAAAT-
-ACWTCAAAGG
 A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---SGCTTCAAAT---
ACATGCTACCTAATAC
 A C G T A C G T A C G T A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----SGCTTCAAAT-
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A C G T A C G T A G T C G T C A C G T A C G T A A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T