Homer de novo Motif Results (homer_motif/CM_male_up_motifs//)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2263
Total background sequences = 95858
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T G C A C G T C G A T C G T A A C G T A G T C C G T A A T G C 1e-50-1.166e+0216.13%6.86%54.6bp (59.5bp)Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer(0.955)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C C G A T A C T G A T C G T G A C C G A T A T C G T C G A T A G C C G T A 1e-41-9.666e+0130.09%18.23%52.2bp (64.2bp)NFIX/MA0671.2/Jaspar(0.840)
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motif file (matrix)
3 A G T C C A G T G T C A C A G T G C A T G A C T G C A T G C A T T C G A C A T G 1e-34-7.872e+019.28%3.56%53.7bp (57.8bp)MEF2A/MA0052.5/Jaspar(0.956)
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motif file (matrix)
4 T G A C A G T C C G T A A T G C A G C T C T G A T A C G C T A G C A T G A C T G T A C G G T A C 1e-29-6.820e+014.33%1.06%33.7bp (61.1bp)CTCF/MA0139.2/Jaspar(0.923)
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motif file (matrix)
5 C T G A A C T G C G A T T A C G A G T C C G A T C T A G C G T A T A G C G C T A 1e-29-6.816e+0128.15%18.33%52.5bp (61.9bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.786)
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motif file (matrix)
6 A T G C G T A C G T C A C T G A T C A G T G C A G C A T G T C A T G C A T C G A G T A C G T C A 1e-29-6.710e+019.94%4.32%55.4bp (60.3bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.859)
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motif file (matrix)
7 C T G A G T A C C G T A A C G T A C G T A G T C A G T C C G T A 1e-28-6.642e+019.54%4.08%53.6bp (60.0bp)TEAD4/MA0809.3/Jaspar(0.997)
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motif file (matrix)
8 C G A T T C A G G T C A A T G C C G T A T G A C G A C T A G C T 1e-22-5.246e+0147.95%37.68%54.0bp (61.2bp)Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer(0.892)
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motif file (matrix)
9 C T G A T A C G A C G T A C T G C G T A A T C G C G A T A T G C C T G A A G C T 1e-17-4.089e+017.11%3.34%48.6bp (62.8bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.961)
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motif file (matrix)
10 A G C T A G C T A G T C G T A C G C T A A T G C G T C A A T G C G T A C A G T C 1e-17-4.043e+0124.83%17.57%54.8bp (59.3bp)KLF2/MA1515.2/Jaspar(0.825)
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motif file (matrix)
11 T C G A C A T G T C G A A C T G A T G C A T C G G T A C C G T A C T A G G A T C 1e-15-3.586e+018.44%4.49%51.2bp (63.9bp)COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer(0.677)
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motif file (matrix)
12 C T A G A G C T A C G T A C G T A G T C A G T C A C G T A C T G 1e-14-3.259e+019.19%5.21%56.3bp (61.4bp)EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer(0.919)
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motif file (matrix)
13 C A G T T A C G A G T C G T C A A T G C G C T A T C A G C G A T C T A G G A T C 1e-12-2.858e+016.63%3.51%49.6bp (65.0bp)PB0199.1_Zfp161_2/Jaspar(0.620)
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motif file (matrix)
14 A C T G C A T G A C G T A C T G C G A T G T A C A C G T A T C G C G A T A C T G C G T A C T G A 1e-12-2.804e+010.71%0.06%52.8bp (64.2bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.619)
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motif file (matrix)
15 * C G A T A C T G C T G A A T G C G A T C A G T C C G A T C T A G C T G A A C G T A C T G A T C G 1e-11-2.598e+011.06%0.17%51.8bp (57.0bp)Nr5A2/MA0505.3/Jaspar(0.679)
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motif file (matrix)
16 * A G T C G T A C G T A C C G T A G T A C A C G T C G A T C T A G C A T G G T A C 1e-11-2.590e+013.27%1.32%55.8bp (60.8bp)NKX2-3/MA0672.2/Jaspar(0.720)
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motif file (matrix)
17 * C A T G T G A C G C A T G C A T C G T A T C A G A T G C G C T A T G C A A T G C 1e-10-2.391e+013.67%1.64%55.0bp (58.7bp)PB0056.1_Rfxdc2_1/Jaspar(0.877)
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motif file (matrix)
18 * T A G C G A T C G T C A G T C A T G C A A G C T T C G A A C G T A C G T C G A T 1e-9-2.237e+011.41%0.36%64.8bp (60.5bp)LHX2/MA0700.3/Jaspar(0.666)
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motif file (matrix)
19 * C G T A T C A G A G T C C G T A T G A C A C G T C T A G A C G T A C T G C G T A G A T C C G T A 1e-9-2.234e+010.31%0.01%49.8bp (93.6bp)PB0099.1_Zfp691_1/Jaspar(0.694)
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motif file (matrix)
20 * C A T G A C T G C T G A C A T G T C A G T A C G G C T A C T A G C A T G T A C G T A C G T A G C 1e-9-2.207e+015.52%3.02%54.2bp (56.7bp)ZNF148/MA1653.2/Jaspar(0.851)
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motif file (matrix)
21 * A C T G C T A G A T G C G T C A G C A T T C G A C T G A A T G C C T A G C G T A 1e-8-1.905e+013.23%1.52%55.7bp (58.3bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.682)
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motif file (matrix)
22 * A T C G C A T G A C T G C T G A A C T G C A T G A T C G G C A T C G A T C G A T T G A C G T A C 1e-7-1.819e+010.18%0.00%32.0bp (23.4bp)MF0003.1_REL_class/Jaspar(0.694)
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motif file (matrix)
23 * A G T C A C G T A C T G A G T C A G T C A C T G A G T C A G T C G A C T A T C G 1e-7-1.743e+010.84%0.17%54.3bp (59.1bp)CTCFL/MA1102.3/Jaspar(0.736)
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motif file (matrix)
24 * A C G T A C T G C G T A A C G T A G T C A C G T A C T G C T G A A C G T A C G T A C T G A C T G 1e-6-1.393e+010.22%0.01%47.0bp (62.6bp)NFYA/MA0060.4/Jaspar(0.788)
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motif file (matrix)
25 * A G T C A G C T C T A G A C T G A C T G A G T C C G A T A C G T T G C A A C T G 1e-4-1.140e+012.39%1.26%59.2bp (59.2bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.769)
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motif file (matrix)
26 * A G T C A C G T A C T G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C G T 1e-4-1.123e+010.35%0.05%31.6bp (62.7bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.793)
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motif file (matrix)
27 * A G T C G A T C G T C A A C G T G A C T G T A C G A C T T C G A A T C G A G T C G A C T T A G C 1e-3-8.000e+003.84%2.61%58.1bp (64.0bp)PB0137.1_Irf3_2/Jaspar(0.635)
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motif file (matrix)
28 * C G T A A G T C A G T C A G T C A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G T A 1e-2-6.832e+000.09%0.00%43.3bp (14.1bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.751)
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motif file (matrix)
29 * A C T G C G T A A G T C G T C A A C T G A G T C A G T C A G T C A C G T C G T A 1e-1-3.735e+000.22%0.07%41.3bp (59.8bp)MEIS2/MA0774.1/Jaspar(0.639)
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motif file (matrix)