Homer de novo Motif Results (homer_motif/FB_female_up_motifs//)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1995
Total background sequences = 96263
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C T A G T A C C T G A A T C G C G A T T C G A G C A T T A C G C A G T G C A T A G T C G A C T 1e-234-5.404e+0225.76%4.37%47.9bp (62.6bp)GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer(0.926)
More Information | Similar Motifs Found
motif file (matrix)
2 T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G C T A T A C G A C G T 1e-151-3.482e+0222.36%5.15%42.9bp (63.2bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.987)
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motif file (matrix)
3 C G A T A T C G G T A C C T A G A C G T T C A G A C T G T A C G G A C T C T A G 1e-92-2.137e+0214.19%3.27%48.1bp (58.5bp)Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer(0.861)
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motif file (matrix)
4 T C G A C T G A T A G C C T G A A T C G T C A G T G C A G C T A C T A G A G C T 1e-56-1.293e+0227.07%13.56%54.6bp (62.7bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.977)
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motif file (matrix)
5 T A C G A G C T A C G T C G T A G A T C C T A G G A T C C G T A C G T A A G C T 1e-47-1.095e+0217.69%7.68%53.0bp (61.4bp)MF0006.1_bZIP_cEBP-like_subclass/Jaspar(0.928)
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motif file (matrix)
6 T G C A G C T A G A T C G T C A C A T G A G T C A C G T C A T G A C T G G A T C 1e-46-1.066e+0225.01%13.05%51.7bp (64.1bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.943)
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motif file (matrix)
7 A T G C G A T C A G T C G A T C C A G T T A C G C T A G T C A G C T G A T G C A 1e-44-1.024e+0227.87%15.46%51.9bp (60.2bp)EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer(0.884)
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motif file (matrix)
8 C A T G T A G C G T A C C T G A T C G A C T A G C G T A G C T A G T A C C G T A 1e-35-8.252e+0118.15%9.07%51.9bp (62.6bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.769)
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motif file (matrix)
9 A G C T C A G T C T A G C T A G T A C G G T C A G T C A T G C A G A C T C G T A 1e-24-5.582e+019.87%4.41%58.4bp (59.7bp)RBPJ/MA1116.2/Jaspar(0.788)
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motif file (matrix)
10 G C T A T C G A C A G T A C T G T C G A T A G C T C A G A G C T G T A C C T G A 1e-18-4.185e+014.86%1.72%51.9bp (61.1bp)JDP2/MA0656.2/Jaspar(0.968)
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motif file (matrix)
11 A T C G G T A C C G A T C G T A A C G T C G A T C A G T C G A T A C G T T C G A 1e-16-3.759e+013.76%1.21%53.7bp (57.9bp)MEF2A/MA0052.5/Jaspar(0.924)
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motif file (matrix)
12 A C T G A T G C G T A C C G A T A T C G T C A G A T G C G A C T A T C G A G T C C G T A A C T G 1e-15-3.494e+012.06%0.43%47.6bp (64.2bp)ZBTB6/MA1581.2/Jaspar(0.646)
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motif file (matrix)
13 A C G T A C T G T A G C A G T C C G T A C G T A G T C A C G A T A C G T C G A T A C G T A C T G 1e-14-3.401e+010.55%0.01%39.3bp (66.4bp)NFIA/MA0670.2/Jaspar(0.720)
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motif file (matrix)
14 T A C G T A G C C G A T T C A G A G C T A C G T A G T C A G T C C T G A C T A G 1e-14-3.268e+013.76%1.33%46.0bp (62.6bp)ZNF189/MA1725.2/Jaspar(0.868)
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motif file (matrix)
15 C G A T T C A G A G C T C G T A A T G C C G A T C T A G G C T A 1e-13-3.213e+017.17%3.56%53.0bp (60.7bp)PB0096.1_Zfp187_1/Jaspar(0.705)
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motif file (matrix)
16 * A C G T A T G C A G T C A G T C A T G C C G A T C T A G C T A G T C A G C A T G A C T G A C T G 1e-10-2.322e+013.36%1.37%53.2bp (57.1bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.706)
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motif file (matrix)
17 * A C G T A G C T G T C A A C G T A C G T C G T A A C G T A G T C 1e-9-2.142e+018.22%4.97%56.4bp (58.1bp)GATA5/MA0766.3/Jaspar(0.809)
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motif file (matrix)
18 * C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C T G A C T G C G T A A C G T A T C G 1e-9-2.075e+010.25%0.00%59.8bp (59.9bp)HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer(0.672)
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motif file (matrix)
19 * C G A T A C G T C G T A A G T C C G T A A T G C T A C G C G T A A C G T A C T G A G T C A C G T 1e-9-2.075e+010.25%0.00%40.4bp (41.7bp)PGR/MA2327.1/Jaspar(0.596)
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motif file (matrix)
20 * A C G T A T C G C G T A A C T G G C T A G T A C C G T A A C T G T A G C A G T C A G T C A C G T 1e-8-1.939e+010.70%0.09%55.2bp (59.9bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.656)
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motif file (matrix)
21 * A C G T A G T C A G T C A G T C C G T A A G T C C G T A C G T A C G T A A G T C C G T A A C T G 1e-7-1.732e+010.25%0.01%33.1bp (61.8bp)MEF2C/MA0497.2/Jaspar(0.602)
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motif file (matrix)
22 * A G T C A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C 1e-6-1.532e+010.25%0.01%35.0bp (50.7bp)NR2F1/MA1538.1/Jaspar(0.712)
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motif file (matrix)
23 * A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C A C T G A G T C 1e-5-1.233e+010.20%0.01%27.2bp (44.4bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.735)
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motif file (matrix)
24 * C G T A C G T A C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C G T 1e-3-7.254e+000.30%0.05%45.6bp (62.1bp)PB0099.1_Zfp691_1/Jaspar(0.783)
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motif file (matrix)