Information for 21-GACACCTCCCAG (Motif 18)

A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G T C A G C G T A A C T G A C T G A C G T C T A G A C G T A G T C
p-value:1e-71
log p-value:-1.636e+02
Information Content per bp:1.979
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.2 +/- 54.9bp
Average Position of motif in Background114.5 +/- 51.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GACACCTCCCAG
NNGGCGACACCTCNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GACACCTCCCAG
ATAAATGACACCTATCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACACCTCCCAG
TGACACCT-----
 A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GACACCTCCCAG
TGACACCTGTCA-
 A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GACACCTCCCAG----
-NGGCCTCCCAGGGAG
 A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GACACCTCCCAG
NTCACACCTN----
 A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G
A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C A C G T A C G T A C G T A C G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GACACCTCCCAG-
-AGACCACCCASR
 A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A C G T
A C G T C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

THAP11/MA1573.1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GACACCTCCCAG--
AGGACTACATTTCCCAGCA
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C G T
T C G A T C A G C T A G T G C A A G T C G A C T G T C A A G T C T C G A G C A T A G C T A G C T G A T C A G T C A G T C C T G A C T A G T G A C T C G A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GACACCTCCCAG--
TGACANARRCCAGRC
 A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

TBX6/MA1567.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACACCTCCCAG
TTCACACCTN----
 A C G T A C G T A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G
G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C A C G T A C G T A C G T A C G T