Information for 24-TTATTGCGTTTG (Motif 20)

A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
Reverse Opposite:
A G T C C T G A C G T A C T G A A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A
p-value:1e-55
log p-value:-1.279e+02
Information Content per bp:1.871
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.2 +/- 56.2bp
Average Position of motif in Background114.6 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGCGTTTG
NTTTTATTGCNN---
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T A C G T A C G T A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGCGTTTG
GTTTTATTGGG----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGCGTTTG
NTTTTATTGC-----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTATTGCGTTTG-
NTTATTGATTTTTT
 A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

CDX4/MA1473.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGCGTTTG
GTTTTATTGCC----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C A C G T A C G T A C G T A C G T

CDX1/MA0878.2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGCGTTTG
GTTTTATGGCC----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TTATTGCGTTTG
NTNAATTTTATTGNATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTGCGTTTG
NAATTTTATTACCNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGCGTTTG
NTTTTATGAC-----
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGCGTTTG-
NNTTTATTGATTTTTT
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A G T C C T A G A G C T A C G T A G C T A C T G A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T