Information for 18-GAGTGCTC (Motif 9)

T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
Reverse Opposite:
C T A G T G C A C T A G G A T C C G T A G A T C C G A T A G T C
p-value:1e-321
log p-value:-7.407e+02
Information Content per bp:1.609
Number of Target Sequences with motif12841.0
Percentage of Target Sequences with motif19.89%
Number of Background Sequences with motif8878.4
Percentage of Background Sequences with motif14.34%
Average Position of motif in Targets99.6 +/- 56.2bp
Average Position of motif in Background99.7 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----GAGTGCTC-----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGCTC
TTAAGTGCTT
 A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGCTC
TTGAGTGSTT
 A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAGTGCTC
TTRAGTGSYK
 A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ZNF274/MA1592.1/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GAGTGCTC---
GGTATGAGTTCTCGCT
 A C G T A C G T A C G T A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C A C G T A C G T A C G T
C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGCTC
CTYRAGTGSY-
 A C G T A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GAGTGCTC--
CNGTCCTCCC
 T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C A C G T A C G T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGCTC
CTTGAGTGGCT
 A C G T A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGCTC
GTGAGTGNAC
 A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

NKX2-5/MA0063.2/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GAGTGCTC
NNTTGAGTGNN-
 A C G T A C G T A C G T A C G T T C A G G C T A C T A G G C A T C T A G G A T C A C G T G A T C
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T