Information for 10-TGGCANNNTGCC (Motif 10)

C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C
Reverse Opposite:
C T A G T C A G G T A C G C T A A T C G G T C A T A G C C G A T A C T G A G T C A G T C G C T A
p-value:1e-501
log p-value:-1.155e+03
Information Content per bp:1.618
Number of Target Sequences with motif5663.0
Percentage of Target Sequences with motif8.77%
Number of Background Sequences with motif2732.1
Percentage of Background Sequences with motif4.40%
Average Position of motif in Targets99.4 +/- 53.2bp
Average Position of motif in Background100.6 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-TGGCANNNTGCC-
CTGGCAGNCTGCCA
 A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TGGCANNNTGCC---
TTGGCANNNTGCCAAG
 A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TGGCANNNTGCC---
NNTGGCACNNTGCCAAN
 A C G T A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C A C G T A C G T A C G T
T A G C G A T C C A G T A C T G A C T G G T A C C T G A G T A C T A G C T C A G G A C T C A T G A G T C A G T C T G C A C G T A T A G C

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TGGCANNNTGCC---
NTTGGCACNNNGCCAAN
 A C G T A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C A C G T A C G T A C G T
T A C G G A C T A C G T A C T G A T C G A G T C C T G A A G T C A T G C T C A G G A C T A C T G A T G C A G T C G T C A C T G A T A G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TGGCANNNTGCC--
TGGCACCATGCCAA
 C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NFIB/MA1643.1/Jaspar

Match Rank:6
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----TGGCANNNTGCC-----
TGCCTGGCATTGTGCCAAGCA
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G A G T C G A T C C A G T A C T G C A T G T G A C G C T A A G C T C A G T T C A G C G A T A C T G A T G C A G T C G T C A C T G A T C A G G A C T G C T A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGGCANNNTGCC
NTTGGCANN-----
 A C G T A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCANNNTGCC
GGTTGGCAT------
 A C G T A C G T A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCANNNTGCC
TNNGGGCAG------
 A C G T A C G T A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCANNNTGCC
NNTTGGCANN-----
 A C G T A C G T A C G T C G A T A C T G A C T G T G A C G C T A A T C G C A G T T A G C C G A T A C T G A G T C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T