Information for 24-GCCAGCCAAG (Motif 21)

A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G
Reverse Opposite:
A T G C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A T C G A G T C
p-value:1e-31
log p-value:-7.187e+01
Information Content per bp:1.930
Number of Target Sequences with motif233.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif93.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets103.2 +/- 52.7bp
Average Position of motif in Background102.1 +/- 52.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCCAGCCAAG
-BCAGACWA-
 A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCAGCCAAG-----
GTCAACCAAGAATTC
 A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCCAGCCAAG--
-NNTGCCAAGNN
 A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G A C G T A C G T
A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCCAGCCAAG
-CGTGCCAAG
 A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCCAAG
TGCCAGCB---
 A C G T A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCCAGCCAAG-
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCCAAG----
TCCCAGMCRAGCCCC
 A C G T A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G A C G T A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCCAGCCAAG---
--AAGGCAAGTGT
 A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCCAGCCAAG------
-SCAGYCADGCATGAC
 A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCAGCCAAG
ATGCCAACC---
 A C G T A C G T A C T G A T G C A G T C C G T A C T A G A G T C A G T C C G T A C G T A A T C G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T