Information for 10-CYTGCCAA (Motif 5)

G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A T C G A G T C C G T A T C G A C A T G
p-value:1e-952
log p-value:-2.193e+03
Information Content per bp:1.793
Number of Target Sequences with motif17758.0
Percentage of Target Sequences with motif27.51%
Number of Background Sequences with motif10585.4
Percentage of Background Sequences with motif17.05%
Average Position of motif in Targets100.0 +/- 54.8bp
Average Position of motif in Background99.6 +/- 64.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:CYTGCCAA
CTTGGCAA
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CYTGCCAA-
CGTGCCAAG
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CYTGCCAA--
GGTGCCAAGT
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A A C G T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.84
Offset:2
Orientation:forward strand
Alignment:CYTGCCAA--
--TGCCAGCB
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A A C G T A C G T
A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CYTGCCAA-
TACTTGGCAGA
 A C G T A C G T G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CYTGCCAA--
-ATGCCAACC
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A A C G T A C G T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CYTGCCAA--
--TGTCANYT
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A A C G T A C G T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CYTGCCAA-
-YTGWCADY
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A A C G T
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CYTGCCAA
GCTGTCAA
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CYTGCCAA
CCTGTCAA
 G T A C A G C T A C G T A C T G A T G C A G T C C G T A C T G A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A