>TATA-Box(TBP)/Promoter/Homer TATA-Box(TBP)/Promoter/Homer A [ 69 138 42 1 476 1 764 701 950 783 140 86 ] C [ 304 328 716 285 172 1 1 1 1 1 4 283 ] G [ 510 355 200 9 1 34 1 1 48 125 850 606 ] T [ 117 178 42 704 351 964 234 297 1 91 6 25 ] >hINR(CPE) hINR(CPE) A [ 74 48 1 997 18 434 ] C [ 355 349 978 1 283 62 ] G [ 365 272 1 1 388 1 ] T [ 206 331 20 1 312 503 ] >AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer A [ 419 1 10 984 62 26 43 980 50 149 ] C [ 275 1 2 3 579 1 943 5 172 444 ] G [ 277 1 965 1 305 1 1 1 307 211 ] T [ 28 997 23 12 54 972 12 14 471 195 ] >AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer A [ 408 153 166 8 1 1 20 99 683 28 1 14 ] C [ 209 88 63 636 997 941 184 353 9 1 1 607 ] G [ 161 111 596 348 1 1 18 506 302 970 997 368 ] T [ 221 647 175 8 1 57 778 42 6 1 1 11 ] >ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer A [ 467 54 390 890 1 832 96 262 203 123 1 47 127 11 102 144 ] C [ 1 1 201 26 988 1 291 233 409 46 11 42 268 944 411 261 ] G [ 427 923 276 39 10 43 414 243 292 1 987 18 198 1 1 240 ] T [ 104 22 133 45 1 124 199 262 96 830 1 892 407 44 485 356 ] >Atoh7(bHLH)/Retina-Atoh7-CutnRun(GSE156756)/Homer Atoh7(bHLH)/Retina-Atoh7-CutnRun(GSE156756)/Homer A [ 195 466 445 1 997 1 349 13 1 1 146 166 ] C [ 175 41 245 997 1 1 586 1 1 179 231 240 ] G [ 263 493 297 1 1 898 51 1 997 585 235 386 ] T [ 367 1 14 1 1 100 14 985 1 235 388 208 ] >Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer A [ 150 23 213 8 6 965 33 1 32 992 ] C [ 132 142 739 11 1 1 369 1 966 1 ] G [ 147 819 35 1 960 1 575 1 1 6 ] T [ 571 16 13 980 33 33 23 997 1 1 ] >Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer A [ 113 41 4 27 545 48 6 893 27 303 473 121 ] C [ 191 453 1 55 32 910 992 1 378 224 16 59 ] G [ 55 95 1 841 338 31 1 1 494 83 357 738 ] T [ 641 411 994 77 85 11 1 105 101 390 153 82 ] >Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer A [ 225 271 221 218 120 32 27 17 25 623 116 65 788 867 412 ] C [ 277 206 218 390 234 207 58 888 648 9 13 33 48 41 175 ] G [ 206 219 348 164 61 52 31 23 12 25 842 867 136 53 222 ] T [ 292 304 213 228 585 709 884 72 315 343 29 35 28 39 190 ] >Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer A [ 402 256 90 20 352 442 1 859 105 171 201 347 231 116 55 1 161 80 904 603 261 ] C [ 156 196 251 110 402 65 969 1 482 332 221 221 196 292 70 25 367 196 1 101 236 ] G [ 211 221 86 1 166 347 20 85 337 221 241 226 342 502 30 959 55 352 70 206 246 ] T [ 231 326 573 869 80 146 10 55 75 276 337 206 231 90 845 15 417 372 25 90 256 ] >CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer A [ 1 1 557 288 786 170 693 405 60 3 266 413 ] C [ 994 947 37 14 13 48 17 3 1 1 302 341 ] G [ 3 1 4 17 41 12 12 17 938 994 230 104 ] T [ 1 51 402 680 160 771 278 575 1 3 202 142 ] >CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer A [ 812 1 1 104 76 192 102 971 993 37 ] C [ 102 3 1 1 624 61 757 27 1 664 ] G [ 61 1 26 795 55 644 3 1 5 143 ] T [ 26 995 972 100 244 104 138 1 1 157 ] >CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer A [ 290 464 16 45 378 81 4 63 997 986 ] C [ 93 160 1 1 3 49 1 867 1 9 ] G [ 336 356 6 921 1 117 994 1 1 1 ] T [ 281 20 977 33 618 752 1 69 1 3 ] >CHR(?)/Hela-CellCycle-Expression/Homer CHR(?)/Hela-CellCycle-Expression/Homer A [ 233 408 172 283 1 12 1 997 997 986 ] C [ 453 51 51 73 12 1 679 1 1 12 ] G [ 313 540 582 35 1 1 185 1 1 1 ] T [ 1 1 195 609 986 986 135 1 1 1 ] >CRE(bZIP)/Promoter/Homer CRE(bZIP)/Promoter/Homer A [ 89 77 67 1 1 981 1 23 1 1 977 5 ] C [ 490 378 308 30 203 1 976 1 27 800 1 649 ] G [ 225 437 604 1 795 17 1 975 1 198 21 281 ] T [ 196 109 21 968 1 1 22 1 971 1 1 65 ] >CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer A [ 447 37 499 33 23 61 79 2 501 2 3 30 382 20 47 2 40 161 277 541 ] C [ 221 340 61 377 378 5 905 994 475 527 995 36 42 273 39 1 34 527 428 92 ] G [ 181 236 330 528 5 887 5 1 7 4 1 4 446 686 14 995 873 61 117 267 ] T [ 151 386 110 61 593 47 10 3 16 467 1 930 130 21 900 2 53 250 178 100 ] >CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer A [ 160 970 1 39 271 977 1 296 480 291 ] C [ 168 15 40 654 1 1 111 279 176 164 ] G [ 260 14 12 1 675 21 12 188 261 260 ] T [ 412 1 947 306 53 1 876 236 83 284 ] >DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer A [ 242 292 105 362 346 916 54 688 387 273 68 53 459 302 106 ] C [ 178 57 42 273 115 8 848 27 97 9 42 11 68 57 722 ] G [ 144 239 757 44 61 13 40 6 108 34 826 14 128 272 53 ] T [ 436 412 96 322 478 63 58 279 408 684 64 922 345 370 119 ] >DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer A [ 116 61 424 1 997 1 1 44 997 997 1 1 792 399 327 ] C [ 327 489 1 1 1 1 13 569 1 1 1 899 14 191 295 ] G [ 231 303 104 997 1 1 1 168 1 1 1 14 1 188 190 ] T [ 326 147 471 1 1 997 985 219 1 1 997 86 193 222 188 ] >Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer A [ 188 899 996 101 9 10 947 975 1 1 985 721 ] C [ 104 2 1 451 826 557 51 23 1 997 1 51 ] G [ 65 98 2 24 9 1 1 1 1 1 1 174 ] T [ 643 1 1 424 156 432 1 1 997 1 13 54 ] >E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer A [ 254 34 137 10 60 44 937 617 372 200 ] C [ 262 40 732 142 61 63 12 46 175 257 ] G [ 434 922 27 819 768 867 50 262 289 300 ] T [ 51 4 104 29 111 26 1 75 164 243 ] >EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer A [ 287 76 5 1 1 1 227 396 1 117 1 849 ] C [ 122 283 160 997 845 997 348 24 1 1 1 1 ] G [ 352 458 1 1 1 1 32 347 997 881 997 133 ] T [ 240 182 833 1 153 1 393 233 1 1 1 17 ] >Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer A [ 467 1 997 1 29 1 1 32 123 217 ] C [ 235 997 1 241 726 1 1 256 231 290 ] G [ 275 1 1 727 244 1 997 248 242 233 ] T [ 22 1 1 31 1 997 1 465 404 261 ] >Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer A [ 128 78 154 1 1 27 1 1 153 34 ] C [ 72 36 523 1 1 1 2 1 415 2 ] G [ 142 882 23 997 282 971 973 997 10 940 ] T [ 658 4 300 1 716 1 24 1 422 24 ] >ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer A [ 353 664 60 28 57 1 934 144 219 166 37 42 729 22 158 ] C [ 257 16 1 4 33 928 7 421 308 283 15 24 164 934 763 ] G [ 221 268 801 950 154 31 26 262 251 387 7 933 38 5 1 ] T [ 168 52 138 18 755 40 33 173 222 164 941 1 69 40 78 ] >Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer A [ 202 10 32 865 14 10 9 14 38 483 ] C [ 185 72 70 70 969 961 32 144 196 135 ] G [ 376 12 894 15 8 24 23 12 611 295 ] T [ 237 906 5 50 9 5 936 830 155 87 ] >ETS(ETS)/Promoter/Homer ETS(ETS)/Promoter/Homer A [ 489 499 34 86 6 12 990 978 49 40 ] C [ 205 210 788 895 3 3 5 7 22 157 ] G [ 188 246 159 5 990 983 2 3 923 16 ] T [ 117 45 19 14 2 3 3 12 6 787 ] >ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer A [ 895 1 1 997 889 546 1 965 14 311 53 39 ] C [ 32 1 1 1 3 18 997 1 209 650 23 10 ] G [ 72 997 997 1 32 435 1 33 573 11 16 854 ] T [ 1 1 1 1 76 1 1 1 204 28 908 97 ] >PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer A [ 171 61 995 974 146 77 7 918 860 967 92 134 ] C [ 8 2 1 1 204 10 2 4 8 8 436 218 ] G [ 808 935 1 2 628 15 989 71 111 12 442 55 ] T [ 13 2 3 23 22 898 2 7 21 13 30 593 ] >ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer A [ 540 93 719 1 1 997 869 116 24 112 ] C [ 88 721 272 1 1 1 1 1 137 128 ] G [ 332 181 8 997 997 1 1 882 1 654 ] T [ 41 4 1 1 1 1 129 1 838 106 ] >FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer A [ 483 644 575 128 1 893 969 997 1 997 ] C [ 26 67 2 1 152 105 29 1 775 1 ] G [ 10 240 111 870 1 1 1 1 1 1 ] T [ 481 49 313 1 846 1 1 1 223 1 ] >FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer A [ 571 343 23 951 977 997 1 946 498 504 509 612 672 151 483 968 3 887 254 353 ] C [ 8 28 405 47 21 1 664 3 164 164 166 107 1 1 153 1 991 1 213 88 ] G [ 138 598 1 1 1 1 3 10 182 177 179 114 270 778 99 5 5 1 221 234 ] T [ 283 31 571 1 1 1 333 41 156 156 146 166 57 70 265 26 1 111 312 324 ] >Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer A [ 259 241 176 1 1 1 1 997 138 1 166 187 ] C [ 191 285 105 1 114 1 1 1 40 51 325 287 ] G [ 278 184 64 997 1 809 702 1 21 1 337 381 ] T [ 272 291 655 1 884 189 296 1 801 947 172 144 ] >FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer A [ 531 64 25 60 5 906 262 27 54 621 128 53 53 138 ] C [ 67 1 13 151 860 28 223 66 76 160 836 890 338 347 ] G [ 360 862 835 167 79 41 260 35 863 152 13 1 72 250 ] T [ 41 73 127 622 57 24 255 872 8 66 23 56 537 265 ] >Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer A [ 109 700 1 997 1 997 997 23 311 309 ] C [ 469 24 1 1 1 1 1 145 237 275 ] G [ 365 1 997 1 1 1 1 830 434 292 ] T [ 57 275 1 1 997 1 1 1 18 124 ] >Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer A [ 430 997 990 1 1 566 18 393 3 18 ] C [ 389 1 8 31 997 19 724 1 1 891 ] G [ 102 1 1 22 1 1 257 53 995 1 ] T [ 78 1 1 946 1 413 1 553 1 91 ] >GFX(?)/Promoter/Homer GFX(?)/Promoter/Homer A [ 542 211 4 65 7 7 15 7 3 928 12 923 ] C [ 139 230 67 887 36 988 8 980 16 34 36 10 ] G [ 260 146 6 36 21 1 973 5 976 25 893 53 ] T [ 59 413 923 12 936 4 4 7 4 12 58 14 ] >GFY(?)/Promoter/Homer GFY(?)/Promoter/Homer A [ 770 43 78 659 64 778 630 75 39 41 26 52 ] C [ 102 874 124 158 852 110 117 176 95 844 918 875 ] G [ 68 47 48 113 49 74 122 121 73 43 27 26 ] T [ 60 36 751 70 35 38 132 628 792 73 29 48 ] >GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer A [ 88 71 28 20 1 5 33 7 9 5 14 78 ] C [ 564 264 24 5 1 13 6 2 2 74 958 634 ] G [ 128 546 15 959 902 980 11 990 972 41 15 41 ] T [ 219 119 933 15 96 2 951 1 16 880 13 246 ] >GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer A [ 528 737 738 1 202 255 1 180 214 298 370 453 1 321 409 3 155 97 126 183 ] C [ 114 31 9 916 446 11 1 221 256 171 50 32 975 417 6 161 143 165 251 237 ] G [ 244 149 130 82 2 408 997 11 21 122 271 248 4 9 383 831 30 55 121 217 ] T [ 114 83 123 1 350 327 1 588 509 409 308 268 20 253 203 5 672 683 502 363 ] >Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer A [ 258 17 989 118 605 292 552 440 391 181 1 997 1 501 169 ] C [ 2 10 2 413 7 246 20 81 177 590 997 1 1 108 477 ] G [ 135 958 7 248 344 280 128 307 265 228 1 1 997 369 184 ] T [ 605 15 2 221 44 182 300 172 167 1 1 1 1 22 169 ] >HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer A [ 66 344 229 1 1 23 1 1 1 47 ] C [ 279 112 319 358 19 1 997 997 1 798 ] G [ 137 179 324 640 979 45 1 1 967 127 ] T [ 518 365 127 1 1 931 1 1 31 28 ] >HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer A [ 153 37 109 958 837 135 190 890 57 1 689 721 ] C [ 33 99 97 8 80 19 305 9 1 18 66 119 ] G [ 670 110 61 28 15 14 314 18 99 2 131 88 ] T [ 144 754 733 6 68 832 191 83 843 979 114 72 ] >HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer A [ 241 471 372 518 113 193 138 18 982 788 875 9 61 57 32 806 ] C [ 406 170 139 9 16 74 318 937 12 19 1 9 21 466 917 66 ] G [ 165 148 393 376 800 375 212 3 4 187 118 963 273 123 2 18 ] T [ 188 211 97 97 71 358 332 42 2 7 6 20 645 354 50 111 ] >HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer A [ 249 130 997 1 1 1 997 1 1 237 ] C [ 192 105 1 1 510 1 1 29 674 380 ] G [ 318 159 1 1 1 997 1 1 1 142 ] T [ 241 606 1 997 488 1 1 969 324 242 ] >HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer A [ 175 168 329 977 1 57 485 989 1 1 801 163 ] C [ 250 316 600 1 1 761 460 1 1 996 1 240 ] G [ 455 77 64 1 1 1 1 1 1 2 1 82 ] T [ 120 439 7 21 997 181 54 9 997 1 197 515 ] >HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer A [ 126 1 1 1 997 1 199 445 1 84 ] C [ 36 1 1 1 1 105 1 1 65 146 ] G [ 95 1 1 1 1 1 391 553 933 488 ] T [ 743 997 997 997 1 893 409 1 1 283 ] >Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer A [ 263 69 1 480 820 1 709 997 997 720 ] C [ 225 708 509 323 1 1 1 1 1 96 ] G [ 277 216 1 1 139 1 140 1 1 62 ] T [ 235 7 489 196 40 997 150 1 1 122 ] >HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer A [ 71 26 32 26 684 1 939 895 194 237 51 19 8 37 481 ] C [ 91 63 921 270 7 1 33 21 345 242 51 21 963 351 134 ] G [ 61 42 22 10 301 997 11 46 235 303 27 38 12 14 217 ] T [ 777 869 25 694 8 1 17 38 225 219 871 922 17 598 169 ] >IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer A [ 51 4 1 4 1 619 242 246 465 1 34 884 161 183 243 ] C [ 508 17 123 81 987 103 222 9 180 1 111 21 513 51 360 ] G [ 300 1 1 4 4 47 244 34 64 1 611 9 257 17 235 ] T [ 141 978 875 911 8 231 291 711 291 997 244 86 69 749 162 ] >ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer A [ 653 8 1 1 1 3 583 79 16 1 9 1 ] C [ 1 288 3 27 1 975 7 393 1 1 45 881 ] G [ 229 676 1 1 25 19 240 471 1 4 4 10 ] T [ 116 28 995 971 973 2 170 56 982 994 943 108 ] >Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer A [ 163 61 1 859 1 855 1 1 1 764 ] C [ 4 907 994 132 997 1 997 997 997 83 ] G [ 827 14 1 8 1 143 1 1 1 6 ] T [ 6 17 4 1 1 1 1 1 1 147 ] >Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer A [ 510 323 22 21 837 994 1 1 842 343 ] C [ 148 151 363 171 85 4 1 80 1 235 ] G [ 156 239 234 1 77 1 1 41 141 410 ] T [ 186 287 380 807 1 1 997 878 16 12 ] >LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer A [ 570 476 1 640 1 1 1 1 170 282 ] C [ 58 278 1 358 997 997 997 547 252 295 ] G [ 371 244 997 1 1 1 1 1 190 270 ] T [ 1 1 1 1 1 1 1 451 388 153 ] >MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer A [ 297 367 393 195 8 108 987 6 1 831 362 416 343 261 196 ] C [ 314 162 137 201 4 880 1 2 990 8 137 22 28 133 202 ] G [ 108 206 174 529 3 1 4 835 4 47 151 26 4 23 111 ] T [ 282 264 296 75 985 11 8 157 5 114 350 536 625 583 491 ] >Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer A [ 259 189 17 641 590 887 871 890 30 935 195 352 ] C [ 99 600 444 119 33 6 6 10 30 2 62 439 ] G [ 337 65 1 78 175 43 24 7 11 58 693 100 ] T [ 305 146 538 162 202 64 99 93 929 5 50 108 ] >MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer A [ 105 170 1 323 1 1 1 532 ] C [ 1 1 997 320 1 1 1 1 ] G [ 843 663 1 355 997 1 1 466 ] T [ 51 166 1 1 1 997 997 1 ] >c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer A [ 251 311 138 1 992 1 112 1 1 23 ] C [ 225 197 504 997 1 932 1 1 1 320 ] G [ 369 336 336 1 6 1 886 1 997 526 ] T [ 155 156 22 1 1 66 1 997 1 130 ] >MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer A [ 125 219 141 454 593 500 423 16 968 875 703 968 1 47 63 ] C [ 78 250 500 171 110 265 78 47 30 1 1 1 1 298 718 ] G [ 281 125 156 156 172 94 187 16 1 109 234 16 997 47 31 ] T [ 516 406 203 219 125 141 313 921 1 15 62 15 1 608 188 ] >Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer A [ 401 85 26 302 919 1 1 736 580 182 ] C [ 24 283 762 619 19 3 364 116 115 477 ] G [ 489 572 16 35 11 1 3 36 240 227 ] T [ 86 60 196 45 52 995 632 112 65 114 ] >NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer A [ 474 183 22 980 13 86 1 1 6 40 ] C [ 163 690 976 2 3 898 1 1 252 303 ] G [ 260 106 1 4 169 14 1 997 137 90 ] T [ 103 21 1 14 815 2 997 1 605 567 ] >NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer A [ 539 58 1 1 1 1 1 925 31 81 ] C [ 29 165 1 1 1 997 997 1 358 254 ] G [ 61 237 30 1 1 1 1 73 59 139 ] T [ 372 539 968 997 997 1 1 1 552 526 ] >NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer A [ 113 67 56 1 19 164 506 179 262 180 264 8 16 5 784 442 ] C [ 473 426 3 1 4 782 186 356 222 271 29 53 960 993 155 64 ] G [ 201 38 158 995 964 43 33 257 211 352 194 784 5 1 3 421 ] T [ 213 470 783 3 14 11 275 208 304 197 513 155 19 1 58 73 ] >NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer A [ 273 248 75 256 24 1 35 490 125 107 1 21 1 1 126 616 ] C [ 184 286 1 8 31 1 1 17 354 260 93 1 1 9 861 112 ] G [ 193 166 1 732 1 121 218 357 63 47 1 1 990 984 7 2 ] T [ 350 299 924 4 945 877 745 137 458 587 905 977 8 6 7 270 ] >NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer A [ 138 73 58 42 99 818 683 155 1 21 1 54 ] C [ 91 35 1 1 44 30 55 34 803 956 962 902 ] G [ 682 840 918 956 856 151 160 90 93 1 1 33 ] T [ 89 53 23 1 1 1 102 721 103 21 36 11 ] >NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer A [ 386 98 2 1 354 602 355 31 1 1 2 261 ] C [ 93 5 1 1 1 138 72 14 193 816 973 609 ] G [ 197 728 992 965 622 172 16 17 1 1 1 19 ] T [ 324 170 4 33 23 89 557 937 805 182 23 112 ] >NFY(CCAAT)/Promoter/Homer NFY(CCAAT)/Promoter/Homer A [ 474 228 1 1 997 997 1 81 460 107 ] C [ 49 49 997 997 1 1 1 493 41 179 ] G [ 467 669 1 1 1 1 1 399 498 696 ] T [ 10 54 1 1 1 1 997 27 1 19 ] >Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer A [ 358 353 193 3 650 15 2 23 492 598 ] C [ 149 153 413 901 86 971 2 561 200 40 ] G [ 331 327 385 2 2 2 2 6 197 158 ] T [ 163 169 11 95 263 13 995 411 113 205 ] >Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer A [ 269 359 319 183 57 978 7 28 744 224 221 205 ] C [ 226 246 148 29 893 14 922 43 123 450 150 324 ] G [ 293 139 419 270 43 1 28 901 83 135 268 181 ] T [ 212 256 114 518 7 7 43 28 50 191 362 290 ] >FXR(NR),ER2/Liver-FXR-ChIP-Seq(GSE133700)/Homer FXR(NR),ER2/Liver-FXR-ChIP-Seq(GSE133700)/Homer A [ 270 34 137 502 95 97 78 242 205 424 69 38 125 8 857 ] C [ 243 88 28 195 828 845 377 388 171 120 1 28 192 832 18 ] G [ 249 25 827 175 28 1 140 172 377 377 846 843 194 29 91 ] T [ 238 853 8 128 49 57 404 198 248 79 84 91 489 131 34 ] >NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer A [ 78 52 36 40 17 5 734 41 5 11 8 6 ] C [ 628 170 6 936 4 983 168 77 13 959 20 928 ] G [ 197 106 955 18 976 7 68 167 975 4 922 9 ] T [ 98 673 3 6 3 6 31 715 7 26 50 57 ] >Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer A [ 852 1 1 155 107 8 997 1 676 434 ] C [ 48 1 43 1 1 990 1 4 47 107 ] G [ 48 1 1 1 891 1 1 1 125 63 ] T [ 52 997 955 843 1 1 1 994 152 396 ] >OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer A [ 768 23 29 190 162 85 974 81 537 624 127 935 925 398 222 ] C [ 81 12 102 8 89 908 10 20 103 56 595 18 15 12 53 ] G [ 45 3 14 7 728 1 1 4 186 12 177 10 31 38 644 ] T [ 106 962 856 795 22 5 15 894 174 308 101 38 30 551 81 ] >p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer A [ 264 312 293 415 2 747 325 4 92 156 168 308 310 497 1 526 108 6 107 253 ] C [ 260 205 105 32 992 126 13 2 378 485 372 216 77 8 997 178 39 4 465 380 ] G [ 222 298 339 440 3 37 174 992 9 90 152 311 434 410 1 12 126 988 29 83 ] T [ 254 185 262 113 4 89 487 2 520 269 308 165 178 85 1 283 728 2 400 283 ] >PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer A [ 2 37 856 89 2 116 710 509 2 1 453 30 159 664 244 227 ] C [ 234 890 25 202 569 598 12 33 271 883 33 22 11 81 700 364 ] G [ 462 1 73 605 127 262 264 194 727 15 466 114 827 188 38 170 ] T [ 302 73 46 104 302 24 13 264 1 101 48 834 3 67 17 239 ] >Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer A [ 255 984 997 1 1 949 976 1 1 819 ] C [ 50 1 1 16 954 39 1 1 24 30 ] G [ 87 14 1 1 1 11 22 1 4 14 ] T [ 608 1 1 982 44 1 1 997 971 137 ] >Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer A [ 145 108 42 10 1 1 914 417 1 1 880 314 ] C [ 386 734 51 1 201 997 50 379 1 996 35 265 ] G [ 366 116 1 988 1 1 1 180 1 2 1 223 ] T [ 103 43 906 1 797 1 35 24 997 1 84 198 ] >Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer A [ 744 1 104 477 956 20 937 280 258 72 ] C [ 77 1 19 493 5 29 1 87 62 661 ] G [ 37 1 804 1 1 1 44 23 389 43 ] T [ 142 997 73 29 38 950 18 610 292 224 ] >Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer A [ 194 860 969 135 54 44 191 187 ] C [ 16 1 2 42 671 839 477 219 ] G [ 24 95 4 214 78 6 60 314 ] T [ 766 44 25 609 197 111 273 280 ] >PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer A [ 46 7 38 153 460 31 619 82 113 2 2 665 ] C [ 1 4 7 81 139 551 170 102 179 992 972 105 ] G [ 26 983 951 165 140 188 23 274 98 4 2 13 ] T [ 927 6 4 601 261 230 188 542 610 2 24 217 ] >PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer A [ 510 27 12 75 6 56 1 1 997 765 65 130 ] C [ 11 21 33 12 924 273 832 1 1 34 587 417 ] G [ 380 942 908 155 20 1 81 1 1 27 224 72 ] T [ 99 9 47 758 50 669 85 997 1 174 124 381 ] >PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer A [ 70 80 130 362 179 149 1 9 660 1 153 80 1 1 1 ] C [ 439 680 541 169 289 129 969 989 1 92 100 163 200 9 9 ] G [ 90 70 140 219 302 249 1 1 249 748 727 140 10 1 1 ] T [ 402 170 189 249 229 472 29 1 90 159 20 617 789 989 989 ] >PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer A [ 467 314 218 308 82 792 100 41 890 112 1 577 34 4 330 ] C [ 120 88 5 47 455 1 23 502 3 138 996 45 218 979 125 ] G [ 253 226 676 605 15 189 868 7 94 533 1 1 260 6 3 ] T [ 160 373 101 40 449 18 9 450 13 217 2 377 488 11 542 ] >PSE(SNAPc)/K562-mStart-Seq/Homer PSE(SNAPc)/K562-mStart-Seq/Homer A [ 346 589 269 90 168 769 102 64 474 38 562 769 51 26 320 500 655 693 448 309 ] C [ 154 90 296 282 513 26 782 859 449 218 142 39 321 448 115 26 102 216 128 38 ] G [ 192 179 320 89 77 204 1 1 51 26 167 77 410 102 219 142 102 26 129 589 ] T [ 308 142 115 539 242 1 115 76 26 718 129 115 218 424 346 333 141 65 295 64 ] >PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer A [ 643 122 830 1 1 997 990 24 1 79 ] C [ 1 171 12 1 1 1 1 74 5 97 ] G [ 149 706 157 997 997 1 1 900 1 773 ] T [ 207 2 1 1 1 1 8 1 993 51 ] >REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer A [ 112 62 448 108 6 2 48 38 1 1 579 165 41 1 2 66 10 12 40 761 ] C [ 19 130 303 66 966 2 121 14 985 980 80 86 8 2 3 159 953 20 13 75 ] G [ 771 716 37 717 7 1 822 65 1 1 212 125 931 996 1 701 14 10 914 135 ] T [ 98 93 213 109 21 995 9 883 13 18 130 624 19 1 994 74 23 958 33 29 ] >Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer A [ 102 105 540 94 12 22 32 936 12 56 231 86 25 147 11 865 ] C [ 300 155 11 7 25 29 927 11 511 63 4 1 40 102 895 33 ] G [ 464 139 429 841 933 136 12 4 404 71 761 759 932 144 52 35 ] T [ 135 600 21 57 29 814 29 49 73 811 4 155 3 607 42 66 ] >Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer A [ 49 5 37 125 1 1 810 66 119 83 156 743 933 5 254 ] C [ 3 41 202 62 916 884 75 55 1 3 649 10 21 943 387 ] G [ 942 19 11 654 4 1 52 71 879 912 63 204 41 4 234 ] T [ 6 935 750 159 79 114 63 808 1 2 132 43 5 48 125 ] >Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer A [ 101 50 1 175 63 1 12 62 724 1 61 975 900 1 407 ] C [ 99 49 162 269 70 997 768 173 1 1 876 1 1 997 409 ] G [ 267 889 49 25 359 1 1 1 274 997 1 1 98 1 82 ] T [ 533 12 788 531 508 1 219 764 1 1 62 23 1 1 101 ] >RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer A [ 389 884 804 118 1 651 1 38 31 1 997 272 ] C [ 77 1 1 341 193 1 1 1 78 884 1 264 ] G [ 193 39 1 233 1 347 997 960 77 38 1 310 ] T [ 341 76 194 308 805 1 1 1 814 77 1 154 ] >RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer A [ 70 117 2 1 4 2 1 1 34 410 ] C [ 223 600 6 1 9 1 19 8 161 57 ] G [ 453 48 1 997 25 994 948 45 140 100 ] T [ 255 235 991 1 962 3 32 946 666 433 ] >RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer A [ 107 580 89 122 109 64 950 635 876 36 26 31 60 870 ] C [ 233 27 5 12 130 740 23 44 3 3 8 134 761 43 ] G [ 178 320 845 851 598 159 15 298 101 944 893 244 111 48 ] T [ 482 73 61 15 164 37 12 22 20 17 74 591 68 39 ] >SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer A [ 40 1 847 993 1 997 64 10 8 60 ] C [ 49 979 81 1 997 1 5 1 9 48 ] G [ 735 7 31 1 1 1 922 980 1 825 ] T [ 176 13 41 5 1 1 9 9 982 67 ] >Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer A [ 14 413 766 997 60 214 135 212 997 114 454 145 ] C [ 1 69 135 1 471 355 219 28 1 194 382 520 ] G [ 983 118 5 1 104 105 147 630 1 308 78 126 ] T [ 2 399 94 1 365 325 499 130 1 384 86 209 ] >Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer A [ 143 422 1 1 1 1 353 236 ] C [ 203 71 1 1 905 1 1 295 ] G [ 195 1 997 371 1 1 645 353 ] T [ 459 506 1 627 93 997 1 116 ] >Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer A [ 63 85 797 23 25 29 65 73 158 106 ] C [ 642 707 25 39 24 44 38 214 361 239 ] G [ 160 43 32 29 41 893 35 134 93 339 ] T [ 135 165 146 909 910 34 862 579 388 316 ] >Sp1(Zf)/Promoter/Homer Sp1(Zf)/Promoter/Homer A [ 181 50 13 33 49 1 25 1 1 1 103 37 ] C [ 218 1 870 815 949 997 1 997 997 881 824 512 ] G [ 541 948 61 1 1 1 973 1 1 1 1 221 ] T [ 60 1 56 151 1 1 1 1 1 117 71 230 ] >STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer A [ 178 411 154 1 1 139 12 310 267 24 997 997 508 191 ] C [ 319 163 226 1 1 842 715 186 1 1 1 1 108 222 ] G [ 294 228 108 1 1 1 1 190 709 839 1 1 232 173 ] T [ 209 198 512 997 997 18 273 315 23 136 1 1 152 413 ] >STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer A [ 405 156 1 1 1 115 196 361 439 63 997 997 ] C [ 173 268 1 1 993 429 253 184 1 1 1 1 ] G [ 244 245 1 1 1 1 174 271 434 935 1 1 ] T [ 178 331 997 997 5 455 377 184 126 1 1 1 ] >T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer A [ 924 1 1 1 1 1 215 1 1 1 52 1 ] C [ 39 856 1 1 1 898 1 1 1 59 799 107 ] G [ 36 142 1 1 1 52 783 1 1 1 1 46 ] T [ 1 1 997 997 997 49 1 997 997 939 148 847 ] >Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer A [ 271 77 40 1 165 10 14 956 222 987 158 108 ] C [ 165 250 184 1 337 8 1 4 747 1 40 355 ] G [ 431 583 1 997 103 41 984 18 11 1 673 428 ] T [ 133 90 775 1 395 941 1 22 20 11 129 109 ] >Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer A [ 329 769 145 26 15 20 129 49 889 617 ] C [ 140 32 41 44 67 15 326 376 14 154 ] G [ 336 136 777 892 15 942 46 277 71 151 ] T [ 195 63 37 38 903 23 499 297 26 78 ] >Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer A [ 1 27 1 34 1 852 270 1 6 89 169 184 ] C [ 898 59 52 1 187 23 1 351 1 174 273 220 ] G [ 21 1 1 1 738 1 1 647 1 487 413 238 ] T [ 80 913 946 964 74 124 728 1 992 250 145 357 ] >TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer A [ 227 21 520 87 997 1 1 1 1 600 ] C [ 440 439 1 892 1 1 1 997 997 1 ] G [ 176 103 478 20 1 1 1 1 1 32 ] T [ 157 436 1 1 1 997 997 1 1 367 ] >THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer A [ 59 5 30 25 808 89 182 110 150 697 1 5 242 25 858 ] C [ 1 15 167 792 39 446 478 278 202 10 1 15 155 798 39 ] G [ 847 886 158 99 69 264 168 39 628 273 997 955 120 128 59 ] T [ 93 94 645 84 84 202 173 573 20 20 1 25 483 49 44 ] >THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer A [ 129 55 31 69 723 212 179 59 288 693 1 6 338 63 812 ] C [ 1 12 139 667 91 226 377 290 199 1 1 2 171 738 43 ] G [ 771 786 259 118 77 219 214 84 449 291 997 957 104 105 53 ] T [ 99 147 571 146 109 343 230 567 64 15 1 35 387 94 92 ] >Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer A [ 306 90 874 32 243 98 1 67 215 245 287 249 96 905 27 340 127 1 129 187 ] C [ 329 908 1 222 491 1 1 259 276 252 225 418 902 1 244 405 13 68 267 291 ] G [ 247 1 18 404 239 1 905 423 221 259 278 256 1 1 489 224 1 836 304 264 ] T [ 118 1 107 342 27 900 93 251 289 244 210 76 1 93 241 32 859 95 300 258 ] >VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer A [ 387 387 612 64 19 10 12 935 219 282 209 591 1 1 88 23 762 222 288 243 ] C [ 169 97 1 1 2 46 798 13 286 184 81 1 1 1 71 783 70 209 183 189 ] G [ 225 446 385 919 743 149 122 22 263 155 679 407 994 361 186 36 80 234 300 316 ] T [ 219 70 2 16 236 795 68 30 231 379 30 1 4 637 655 158 88 335 230 252 ] >YY1(Zf)/Promoter/Homer YY1(Zf)/Promoter/Homer A [ 102 997 995 147 997 1 1 1 1 57 45 97 ] C [ 696 1 1 160 1 1 1 1 980 75 4 852 ] G [ 170 1 3 661 1 1 997 997 1 815 942 13 ] T [ 32 1 1 32 1 997 1 1 18 53 9 39 ] >Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer A [ 278 446 287 43 467 21 1 1 219 249 ] C [ 283 160 127 131 1 78 1 653 489 396 ] G [ 94 261 216 825 502 900 875 233 104 125 ] T [ 345 133 370 1 30 1 123 113 188 230 ] >ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer A [ 307 252 308 52 10 42 793 16 867 699 32 191 259 172 333 ] C [ 184 139 223 201 938 129 13 3 52 68 894 563 301 181 240 ] G [ 298 518 201 78 26 36 181 978 45 123 32 65 178 437 301 ] T [ 210 91 269 669 26 793 13 3 36 110 42 181 262 210 126 ] >Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer A [ 248 390 217 9 11 4 5 15 6 700 ] C [ 280 202 211 17 12 984 537 9 923 94 ] G [ 217 170 224 50 974 5 453 965 25 140 ] T [ 255 237 348 924 3 7 5 11 46 66 ] >Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer A [ 196 168 112 45 1 203 1 67 42 19 127 1 1 1 707 ] C [ 123 100 30 161 997 84 393 1 191 784 209 1 1 1 89 ] G [ 521 464 570 778 1 32 154 923 367 55 3 997 997 997 167 ] T [ 160 268 288 16 1 681 451 9 400 142 661 1 1 1 37 ] >ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer A [ 922 1 1 1 1 1 358 188 ] C [ 1 1 1 997 997 113 138 198 ] G [ 76 997 997 1 1 1 360 533 ] T [ 1 1 1 1 1 885 144 81 ] >Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer A [ 179 208 170 133 150 1 89 133 64 1 145 1 238 1 275 ] C [ 173 215 494 552 436 995 894 235 10 949 20 3 123 87 356 ] G [ 441 511 178 110 74 3 1 2 925 48 61 995 287 815 135 ] T [ 207 66 158 205 340 1 16 630 1 2 774 1 351 97 233 ] >ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer A [ 154 76 566 1 514 1 974 1 1 920 1 1 128 155 178 ] C [ 77 745 76 922 153 410 1 1 1 1 1 1 154 409 410 ] G [ 642 1 333 76 230 50 24 948 1 78 997 997 307 181 130 ] T [ 127 178 25 1 103 539 1 50 997 1 1 1 411 254 283 ] >ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer A [ 185 177 81 178 517 64 509 380 823 161 146 815 24 24 65 137 266 282 24 97 242 178 186 202 782 ] C [ 412 105 97 129 16 347 145 250 1 129 129 105 48 97 612 194 210 1 32 210 201 40 145 588 73 ] G [ 129 97 476 548 346 81 40 16 96 654 121 56 49 185 8 121 113 524 936 16 347 468 500 49 81 ] T [ 274 621 347 145 121 508 306 355 80 56 604 24 879 694 315 548 411 193 8 677 210 314 169 161 64 ] >ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer A [ 536 263 63 182 1 1 1 936 42 367 804 78 28 1 234 ] C [ 180 177 340 52 997 997 997 1 114 307 45 22 380 997 386 ] G [ 148 135 87 11 1 1 1 59 527 313 148 410 484 1 15 ] T [ 136 425 510 755 1 1 1 4 317 13 3 490 107 1 366 ] >Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer A [ 152 333 5 1 1 1 1 1 1 138 ] C [ 413 240 334 1 512 997 1 997 997 658 ] G [ 242 309 660 1 486 1 1 1 1 2 ] T [ 193 118 1 997 1 1 997 1 1 203 ] >ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer A [ 380 133 74 102 156 652 1 135 496 985 1 168 ] C [ 211 64 32 308 842 5 997 123 118 5 601 318 ] G [ 254 592 801 508 1 342 1 160 248 5 1 65 ] T [ 155 211 93 82 1 1 1 582 139 5 397 450 ] >ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer A [ 245 1 1 472 1 1 357 1 132 38 189 208 206 1 75 ] C [ 1 1 997 37 18 755 94 1 94 472 340 433 189 943 302 ] G [ 753 1 1 94 811 37 1 997 1 94 57 76 1 1 132 ] T [ 1 997 1 397 170 207 548 1 773 396 415 283 604 55 491 ] >ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer A [ 324 249 270 1 98 1 86 108 265 685 ] C [ 175 183 290 980 9 1 1 1 686 94 ] G [ 92 344 201 1 89 951 873 890 1 48 ] T [ 410 224 239 18 804 47 40 1 48 173 ] >ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer A [ 158 178 131 15 20 646 550 4 200 292 187 355 ] C [ 250 12 2 2 32 10 2 1 8 51 628 302 ] G [ 80 780 854 978 894 337 376 992 770 564 44 150 ] T [ 512 30 13 5 54 7 72 3 22 93 141 193 ] >cTATA(CPE) cTATA(CPE) A [ 1 997 1 997 499 997 499 1 ] C [ 1 1 1 1 1 1 1 499 ] G [ 1 1 1 1 1 1 1 499 ] T [ 997 1 997 1 499 1 499 1 ] >DPR(core promoter) DPR(core promoter) A [ 258 247 294 354 177 96 561 49 66 85 252 ] C [ 59 64 205 341 6 83 121 532 173 267 160 ] G [ 581 465 331 143 790 771 61 170 675 264 373 ] T [ 100 222 168 160 25 49 254 247 85 382 213 ] >hTCT(CPE) hTCT(CPE) A [ 113 1 1 1 1 1 1 1 1 1 72 ] C [ 237 516 39 231 344 997 112 447 73 237 389 ] G [ 264 332 425 264 1 1 1 1 1 1 148 ] T [ 385 151 535 504 654 1 886 551 925 761 391 ] >Inr Inr A [ 208 190 138 60 623 237 260 225 220 ] C [ 343 243 273 527 59 175 156 204 247 ] G [ 264 349 331 130 277 347 306 321 275 ] T [ 183 216 256 281 39 240 275 248 256 ] >polyAsite/CPSF/Homer polyAsite/CPSF/Homer A [ 134 107 219 992 917 1 983 985 997 240 ] C [ 157 108 440 3 5 4 1 9 1 128 ] G [ 156 149 126 2 10 2 12 3 1 505 ] T [ 553 636 215 3 68 993 4 3 1 127 ] >SpliceAceptor/Homer SpliceAceptor/Homer A [ 100 122 105 72 111 418 1 997 1 152 ] C [ 284 445 359 395 360 157 738 1 1 105 ] G [ 151 110 106 41 57 327 1 1 997 665 ] T [ 465 323 430 493 472 97 260 1 1 78 ] >SpliceDonor/U1snRNP/Homer SpliceDonor/U1snRNP/Homer A [ 289 642 58 7 14 615 779 58 143 255 ] C [ 423 110 34 8 17 18 54 51 140 226 ] G [ 176 112 867 979 7 345 102 845 150 321 ] T [ 112 136 41 6 962 22 65 46 567 198 ]