name	raw_reads	written_reads	average_input_read_length	before_alignment_dup	after_alignment_dup	align_0_time	exactly_1_time	uniq_ratio	gt_1_time	auc_genebody	assigned_reads_number	reads_ratio_with_gene_feature	all_gene_num	genes_CPM_gt_1
C1_diff_day5_rep1	27555241	27555238	49	0.157023	0.436352	365818	22980774	0.833989312667	4208646	82.0501	16075029	0.699499024706	30110	15772
C1_diff_day5_rep2	28116110	28116110	49	0.15947	0.497568	327862	22292899	0.79288703167	5495349	81.8334	16488640	0.739636419651	29831	15720
C1_diff_day5_rep3	30484033	30484032	49	0.180372	0.479623	420868	25401604	0.833275729405	4661560	82.1881	19243199	0.757558420327	30297	15640
C1_diff_day5_rep4	28163774	28163774	49	0.169072	0.468407	294469	23057722	0.818701428296	4811583	82.5439	16381983	0.710477080086	30381	15876
C1_undiff_day0_rep1	28953111	28953110	49	0.17290499999999998	0.497005	342783	23838150	0.823336422235815	4772177	80.7231	18172580	0.7623318084666805	30050	15694
C1_undiff_day0_rep2	25513954	25513954	49	0.1441119999999999	0.396516	411376	21361621	0.8372524697661523	3740957	81.303	12834729	0.6008312290532634	30642	16799
C1_undiff_day0_rep3	26588284	26588283	49	0.1369070000000001	0.387629	351132	22003614	0.8275680682351696	4233537	82.7771	12026240	0.5465574882380685	32029	17577
C1_undiff_day0_rep4	30572381	30572381	49	0.16048299999999993	0.442288	450376	24972830	0.8168428229387825	5149175	79.9557	15071452	0.6035139789923689	31800	16713
C9_diff_day5_rep1	34694651	34694651	49	0.178152	0.487123	406087	29116523	0.839222247833	5172041	80.5441	21411398	0.735369329641	30663	15517
C9_diff_day5_rep2	29851279	29851279	49	0.188403	0.507914	275111	24331802	0.815100820303	5244366	80.1624	18714648	0.769143526649	29726	15382
C9_diff_day5_rep3	27277293	27277293	49	0.178389	0.485011	329604	22561777	0.827126687388	4385912	81.7418	17503533	0.775804716091	29119	15486
C9_diff_day5_rep4	25930590	25930588	49	0.166147	0.470741	339457	21378779	0.824461790068	4212352	81.8585	16331725	0.763922252061	29373	15479
C9_undiff_day0_rep1	26180904	26180904	49	0.183118	0.532163	214141	21189027	0.809331373737133	4777736	79.9461	16928024	0.7989052069262076	28849	15339
C9_undiff_day0_rep2	31434008	31434007	49	0.183882	0.534015	391430	25252731	0.8033570457625717	5789846	79.5972	19474124	0.7711690272232338	30254	15632
C9_undiff_day0_rep3	30634652	30634651	49	0.152497	0.46899	425887	24707232	0.8065125990826532	5501532	80.1586	16774182	0.6789178973994335	31260	16325
C9_undiff_day0_rep4	27700638	27700635	49	0.15938599999999992	0.447996	376290	22879297	0.8259484665243234	4445048	82.7605	15050770	0.6578335864078341	31092	16391
wt_diff_day5_rep1	32211640	32211640	49	0.193619	0.545525	333306	25664610	0.796749560097	6213724	79.3598	20035703	0.78067436053	29125	15082
wt_diff_day5_rep2	32126760	32126760	49	0.166191	0.475691	400140	26580446	0.827361551554	5146174	80.1159	18793685	0.707049272236	30724	15873
wt_diff_day5_rep3	28499881	28499880	49	0.164205	0.515451	342081	22550068	0.791233787651	5607731	80.4557	17137196	0.759962054216	29055	15318
wt_diff_day5_rep4	28674866	28674864	49	0.168511	0.50112	284868	23043635	0.803617935206	5346361	80.3204	17356300	0.753192801396	29351	15516
wt_undiff_day0_rep1	34407033	34407033	49	0.18301500000000004	0.499219	370554	28729045	0.8349759480859625	5307434	79.7775	21241260	0.7393653356733577	30379	15473
wt_undiff_day0_rep2	27364779	27364779	49	0.16431799999999996	0.503934	280976	21974089	0.8030062658280558	5109714	80.3387	16555619	0.7534154885783888	30365	15939
wt_undiff_day0_rep3	26898731	26898731	49	0.16905100000000006	0.514823	286268	21492442	0.7990132322599159	5120021	80.8698	16381380	0.7621925884457429	29698	15680
wt_undiff_day0_rep4	32680376	32680376	49	0.1624500000000001	0.479554	443166	26664963	0.8159319525577062	5572247	80.0276	18658676	0.6997450549621989	31160	16058
