[
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/step2.1_Star_HTE-1-R1.Unique.stranded.bg.gz",
      "name": "HTE-1-R1.Unique.stranded.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/step2.1_Star_HTE-3-R1.Unique.stranded.bg.gz",
      "name": "HTE-3-R1.Unique.stranded.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/step2.1_Star_HTM-1-R1.Unique.stranded.bg.gz",
      "name": "HTM-1-R1.Unique.stranded.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/step2.1_Star_HTM-3-R1.Unique.stranded.bg.gz",
      "name": "HTM-3-R1.Unique.stranded.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/lib054_combined_corrected_q60.bedGraph.gz",
      "name": "lib054_combined_corrected_q60.bedGraph.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/lib055_combined_corrected_q60.bedGraph.gz",
      "name": "lib055_combined_corrected_q60.bedGraph.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/lib056_combined_corrected_q60.bedGraph.gz",
      "name": "lib056_combined_corrected_q60.bedGraph.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/lib057_combined_corrected_q60.bedGraph.gz",
      "name": "lib057_combined_corrected_q60.bedGraph.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/lib058_combined_corrected_q60.bedGraph.gz",
      "name": "lib058_combined_corrected_q60.bedGraph.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/lib059_combined_corrected_q60.bedGraph.gz",
      "name": "lib059_combined_corrected_q60.bedGraph.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bed",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/merged_cage_4sources_hg38_arranged.bed.gz",
      "name": "cage_4sources",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bigWig",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/step3.2_normalized_per_10M_SRR7161122_1.bigWig",
      "name": "atac_SRR7161122",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bigWig",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/epigenetic/step3.2_normalized_per_10M_HMLE_Parental_H3K4me3_SRR1043701_1.bigWig",
      "name": "H3K4me3_parental",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "bigWig",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/epigenetic/step3.2_normalized_per_10M_HMLE_Twist2D_H3K4me3_SRR1043705_1.bigWig",
      "name": "H3K4me3_Twist3D",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "refBed",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/gencode.v27.annotation.bed.gz",
      "name": "gencode_v27",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    { 
      "type": "refBed",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/assembly_q60/OUT.transcript_models_filtered_modified.bed.gz",
      "name": "isoquant_q60",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/ribo_seq/ribodoc/E.1.25-35.bg.gz",
      "name": "E.1.25-35.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/ribo_seq/ribodoc/E.2.25-35.bg.gz",
      "name": "E.2.25-35.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/ribo_seq/ribodoc/M.1.25-35.bg.gz",
      "name": "M.1.25-35.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },
    {
      "type": "bedgraph",
      "url": "https://128.252.146.175/Public_SPACE/shuhua/Public_html/EMT_study/ribo_seq/ribodoc/M.2.25-35.bg.gz",
      "name": "M.2.25-35.bg.gz",
      "mode": "show",
      "colorpositive": "#3c67e8",
      "height": 50
    },



]
